Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 Y_RNA.222-201ENST00000364264 102 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 RNU6-1019P-201ENST00000364424 107 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.329-201ENST00000365209 107 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 RNU6-505P-201ENST00000384427 107 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 RNA5SP323-201ENST00000391094 133 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 AL512604.1-201ENST00000404812 257 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 RNU6-1186P-201ENST00000410429 97 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 HMGN2P38-201ENST00000423806 265 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 AL358176.2-201ENST00000425769 204 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 AC245047.4-201ENST00000433189 144 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 RPS26P55-201ENST00000471178 356 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.85□□□□□ -2.11
HINT3Q9NQE9 SNORA70.12-201ENST00000516084 153 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 RNU1-142P-201ENST00000516682 145 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 RNU7-128P-201ENST00000517247 62 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 AC024995.1-201ENST00000523014 93 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 AP003733.2-201ENST00000529409 171 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.85□□□□□ -2.11
HINT3Q9NQE9 MIR4298-201ENST00000584380 73 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 PRR13P7-201ENST00000605538 430 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 U6.108-201ENST00000637764 58 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.85□□□□□ -2.11
HINT3Q9NQE9 AC010615.1-201ENST00000594254 1764 ntBASIC1.85□□□□□ -2.11
HINT3Q9NQE9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
HINT3Q9NQE9 AC008555.8-201ENST00000623602 2168 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 snoU2_19.2-201ENST00000363024 80 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 RNU1-22P-201ENST00000363334 158 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 SNORA8-201ENST00000384574 139 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 Y_RNA.581-201ENST00000391017 97 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 RNU2-61P-201ENST00000411069 191 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 AL158823.1-201ENST00000418441 478 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 EBAG9P1-201ENST00000418955 543 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.84□□□□□ -2.11
HINT3Q9NQE9 HSPE1P25-201ENST00000455484 251 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 RPS29P21-201ENST00000496272 170 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 AC097462.1-201ENST00000514125 324 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 RNU7-99P-201ENST00000516271 62 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.84□□□□□ -2.11
HINT3Q9NQE9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.84□□□□□ -2.11
HINT3Q9NQE9 AC084364.2-201ENST00000546924 395 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 AC008269.2-201ENST00000561915 1105 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.84□□□□□ -2.11
HINT3Q9NQE9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
HINT3Q9NQE9 RNU4-90P-201ENST00000362773 141 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 RNU6-238P-201ENST00000363313 106 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.383-201ENST00000383855 97 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 RNU6-1105P-201ENST00000384774 107 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 MIR215-201ENST00000384858 110 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 MIR17-201ENST00000385012 84 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HINT3Q9NQE9 RNA5SP100-201ENST00000410903 110 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 RNA5SP59-201ENST00000410922 110 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 AL139156.1-201ENST00000412785 841 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 POLR2KP2-201ENST00000438155 177 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 RPS27P21-201ENST00000486977 252 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 AC010409.1-201ENST00000487382 476 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 AL163195.1-201ENST00000496941 348 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.83□□□□□ -2.12
HINT3Q9NQE9 MIR514B-201ENST00000516774 80 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 RNU7-172P-201ENST00000517125 64 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.83□□□□□ -2.12
HINT3Q9NQE9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.83□□□□□ -2.12
HINT3Q9NQE9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.83□□□□□ -2.12
HINT3Q9NQE9 MIR4287-201ENST00000579398 78 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 DEFB117-201ENST00000602356 141 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.83□□□□□ -2.12
HINT3Q9NQE9 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 MIR219B-201ENST00000637023 88 ntBASIC1.83□□□□□ -2.12
HINT3Q9NQE9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
HINT3Q9NQE9 RNU6-1309P-201ENST00000363305 108 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 RNU6-112P-201ENST00000363599 104 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 RNU4-52P-201ENST00000384209 138 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.512-201ENST00000384518 102 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 SNORA64-201ENST00000384674 134 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.574-201ENST00000384766 95 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.82□□□□□ -2.12
HINT3Q9NQE9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.82□□□□□ -2.12
HINT3Q9NQE9 RNU1-41P-201ENST00000516161 162 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 RNU1-48P-201ENST00000516400 162 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.82□□□□□ -2.12
HINT3Q9NQE9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.82□□□□□ -2.12
HINT3Q9NQE9 MIR3935-201ENST00000583472 104 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 AL773524.1-201ENST00000614065 229 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 AC127459.3-201ENST00000624328 466 ntBASIC1.82□□□□□ -2.12
HINT3Q9NQE9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
HINT3Q9NQE9 AL356292.1-201ENST00000283110 373 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.133-201ENST00000363428 110 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.176-201ENST00000363815 109 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 RNU6-117P-201ENST00000365415 107 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 RNU6-296P-201ENST00000384608 107 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 Y_RNA.541-201ENST00000384640 113 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 RNU6-713P-201ENST00000384761 107 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HINT3Q9NQE9 RNA5SP212-201ENST00000391223 107 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 AC010154.1-201ENST00000425857 269 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 HSPE1P13-201ENST00000451143 297 ntBASIC1.81□□□□□ -2.12
HINT3Q9NQE9 RNA5SP57-201ENST00000459463 123 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms