Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU6-740P-201ENST00000364734 105 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 SNORA20B-201ENST00000384220 132 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 RNU2-14P-201ENST00000411053 191 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 AL135790.2-201ENST00000437701 267 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 AC011753.1-201ENST00000451001 220 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 AL139109.1-201ENST00000455491 297 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 snoU13.23-201ENST00000458863 104 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.3□□□□□ -2.04
USP29Q9HBJ7 DEFB122-202ENST00000569013 197 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 AC037487.3-201ENST00000606668 112 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 AC009831.4-201ENST00000620744 325 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.3□□□□□ -2.04
USP29Q9HBJ7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.3□□□□□ -2.04
USP29Q9HBJ7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
USP29Q9HBJ7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
USP29Q9HBJ7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 RNU6-324P-201ENST00000363957 106 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 Y_RNA.217-201ENST00000364214 105 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 SNORD114-6-201ENST00000364393 72 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 RNU6-338P-201ENST00000383888 105 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 RNU6-651P-201ENST00000411040 105 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 SUMO1P2-201ENST00000452524 304 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 Y_RNA.641-201ENST00000459414 105 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 HMGB3P3-201ENST00000510526 400 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.29□□□□□ -2.04
USP29Q9HBJ7 MIR5002-201ENST00000584713 97 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 BX284668.6-201ENST00000606899 438 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 AC245884.12-201ENST00000615364 59 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 AC141273.2-201ENST00000618989 130 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 MIR6873-201ENST00000622788 63 ntBASIC2.29□□□□□ -2.04
USP29Q9HBJ7 Y_RNA.76-201ENST00000362931 109 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 Y_RNA.124-201ENST00000363339 93 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 RNY1-201ENST00000364228 113 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 Y_RNA.257-201ENST00000364596 102 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 RNU6-847P-201ENST00000411115 108 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 EDDM3CP-201ENST00000415977 425 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 AC060773.1-201ENST00000421698 310 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.28□□□□□ -2.04
USP29Q9HBJ7 AC010598.1-201ENST00000510378 103 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.28□□□□□ -2.04
USP29Q9HBJ7 RNA5SP137-201ENST00000516833 135 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 MIR3126-201ENST00000577443 74 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 MIR4282-201ENST00000583613 67 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.15-201ENST00000611544 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.16-201ENST00000613119 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 AC022202.1-201ENST00000613515 211 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.12-201ENST00000613778 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.20-201ENST00000613956 192 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.9-201ENST00000615427 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.11-201ENST00000616345 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.2-201ENST00000616535 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.3-201ENST00000617785 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.19-201ENST00000618602 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 RNU2-1-201ENST00000618664 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.6-201ENST00000619225 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.5-201ENST00000619465 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 U2.10-201ENST00000620268 191 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 MIR203B-201ENST00000636080 86 ntBASIC2.28□□□□□ -2.04
USP29Q9HBJ7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP29Q9HBJ7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
USP29Q9HBJ7 SNORA27.1-201ENST00000362604 124 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 SNORD114-1-201ENST00000362705 72 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.54-201ENST00000362766 105 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.269-201ENST00000364685 89 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 RNU6-662P-201ENST00000384253 104 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 MIR524-201ENST00000385242 87 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 RNU6-907P-201ENST00000390924 102 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 MIR873-201ENST00000401120 77 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 AC008134.1-201ENST00000420943 193 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 RPL23AP7-203ENST00000449021 469 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 AC108210.2-201ENST00000503681 201 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.27□□□□□ -2.05
USP29Q9HBJ7 MIR5694-201ENST00000581190 76 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 AL159152.1-201ENST00000635019 2587 ntBASIC2.27□□□□□ -2.05
USP29Q9HBJ7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USP29Q9HBJ7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.82-201ENST00000363000 102 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.92-201ENST00000363043 102 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.117-201ENST00000363294 101 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 RNU6-801P-201ENST00000364087 105 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.235-201ENST00000364412 102 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.306-201ENST00000365015 102 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.312-201ENST00000365089 102 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.322-201ENST00000365151 102 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 RNU6-514P-201ENST00000384208 107 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.552-201ENST00000384665 112 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.26□□□□□ -2.05
USP29Q9HBJ7 SNORD2.1-201ENST00000458762 69 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 RNU1-131P-201ENST00000458943 161 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.650-201ENST00000459002 102 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USP29Q9HBJ7 Y_RNA.777-201ENST00000516982 102 ntBASIC2.26□□□□□ -2.05
USP29Q9HBJ7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.26□□□□□ -2.05
USP29Q9HBJ7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.26□□□□□ -2.05
USP29Q9HBJ7 AC026271.5-201ENST00000577873 130 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms