Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.39□□□□□ -2.35
ALX4Q9H161 MTND1P11-201ENST00000456661 876 ntBASIC0.39□□□□□ -2.35
ALX4Q9H161 AP000870.1-201ENST00000472927 406 ntBASIC0.39□□□□□ -2.35
ALX4Q9H161 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.39□□□□□ -2.35
ALX4Q9H161 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.39□□□□□ -2.35
ALX4Q9H161 RNA5SP20-201ENST00000515976 84 ntBASIC0.39□□□□□ -2.35
ALX4Q9H161 RNU6-496P-201ENST00000516145 99 ntBASIC0.39□□□□□ -2.35
ALX4Q9H161 Y_RNA.683-201ENST00000516508 93 ntBASIC0.39□□□□□ -2.35
ALX4Q9H161 AL158211.1-201ENST00000566763 763 ntBASIC0.39□□□□□ -2.35
ALX4Q9H161 MIR3192-201ENST00000584920 77 ntBASIC0.39□□□□□ -2.35
ALX4Q9H161 AC121247.2-201ENST00000604776 136 ntBASIC0.39□□□□□ -2.35
ALX4Q9H161 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
ALX4Q9H161 Y_RNA.330-201ENST00000365230 109 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 Y_RNA.336-201ENST00000365307 109 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 MIR517A-201ENST00000385001 87 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 MIR891A-201ENST00000401237 79 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 RNU7-175P-201ENST00000515915 61 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 RNU6-1291P-201ENST00000516591 104 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.38□□□□□ -2.35
ALX4Q9H161 AL358944.1-201ENST00000528537 144 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.38□□□□□ -2.35
ALX4Q9H161 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.38□□□□□ -2.35
ALX4Q9H161 AC018659.1-201ENST00000551083 169 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 MIR5696-201ENST00000578474 85 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 AC131055.1-201ENST00000584626 316 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 SEPT14P17-201ENST00000617978 177 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.38□□□□□ -2.35
ALX4Q9H161 MIR924-201ENST00000638017 53 ntBASIC0.38□□□□□ -2.35
ALX4Q9H161 SNORA27.1-201ENST00000362604 124 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 RNU6-1085P-201ENST00000363576 107 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 RNU6-407P-201ENST00000365280 104 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 SNORD99-201ENST00000408612 74 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 RNU5A-5P-201ENST00000411054 116 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 AC018865.2-201ENST00000423631 129 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 RPL23AP50-201ENST00000434149 455 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 AL162725.1-201ENST00000435405 301 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 Z98949.2-201ENST00000440996 144 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 AC018710.1-201ENST00000506509 158 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 RNU6-1278P-201ENST00000516130 107 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 AC093913.1-201ENST00000614178 329 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 AC007014.2-201ENST00000615581 479 ntBASIC0.37□□□□□ -2.35
ALX4Q9H161 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
ALX4Q9H161 MIR103A2-201ENST00000362154 78 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 Y_RNA.553-201ENST00000384670 102 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 MIR520G-201ENST00000385064 90 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 SNORD89-201ENST00000390981 114 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 ZNF885P-201ENST00000420174 1098 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.36□□□□□ -2.35
ALX4Q9H161 AL590632.1-201ENST00000424289 371 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 MTCO1P19-201ENST00000443487 500 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC233266.1-201ENST00000454518 96 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 HMGN2P26-201ENST00000463169 339 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 CYCTP-201ENST00000504253 315 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.36□□□□□ -2.35
ALX4Q9H161 AC046134.1-201ENST00000514454 666 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 RNU6-1110P-201ENST00000516462 101 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 Y_RNA.717-201ENST00000517106 92 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 RNU6-1116P-201ENST00000517269 99 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AP003716.2-201ENST00000528260 108 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC109810.1-201ENST00000534066 224 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 ZNF519P2-201ENST00000557032 169 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC023827.1-201ENST00000569247 97 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC119751.7-201ENST00000600494 245 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC124303.1-201ENST00000605703 360 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC092954.2-201ENST00000609103 430 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC019193.3-201ENST00000609144 554 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC242852.1-201ENST00000612151 96 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AL138726.1-201ENST00000614873 333 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC243994.1-201ENST00000618627 109 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC244015.1-201ENST00000622301 99 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC027279.3-201ENST00000625055 122 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 AC068137.3-201ENST00000639191 341 ntBASIC0.36□□□□□ -2.35
ALX4Q9H161 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
ALX4Q9H161 Y_RNA.115-201ENST00000363272 98 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 RNA5SP457-201ENST00000363657 124 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 Y_RNA.372-201ENST00000365599 102 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 Y_RNA.373-201ENST00000365600 103 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 RNU6-1264P-201ENST00000383891 107 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 RNU6-281P-201ENST00000384212 103 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 AC243428.1-201ENST00000421099 264 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 AL137792.2-201ENST00000443484 235 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 RNU6-1114P-201ENST00000516022 107 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 MTND4LP26-201ENST00000518144 282 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.35□□□□□ -2.35
ALX4Q9H161 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
ALX4Q9H161 AC120024.3-201ENST00000603167 156 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 Z83818.1-201ENST00000603584 150 ntBASIC0.35□□□□□ -2.35
ALX4Q9H161 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.35□□□□□ -2.35
ALX4Q9H161 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
ALX4Q9H161 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.34□□□□□ -2.36
ALX4Q9H161 RNU6-945P-201ENST00000383947 107 ntBASIC0.34□□□□□ -2.36
ALX4Q9H161 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
ALX4Q9H161 MIR452-201ENST00000385020 85 ntBASIC0.34□□□□□ -2.36
ALX4Q9H161 RNU6-1068P-201ENST00000410958 103 ntBASIC0.34□□□□□ -2.36
ALX4Q9H161 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms