Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 MIR517A-201ENST00000385001 87 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.582-201ENST00000391023 95 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 ZNF885P-201ENST00000420174 1098 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 ERLEC1P1-201ENST00000433806 578 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 MTCO1P19-201ENST00000443487 500 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 AC067940.1-201ENST00000458411 300 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 AC018710.1-201ENST00000506509 158 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 RNU6-1110P-201ENST00000516462 101 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 RNU6-835P-201ENST00000516974 104 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 RNU6-1116P-201ENST00000517269 99 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 AL358944.1-201ENST00000528537 144 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.32□□□□□ -2.36
UPK3BQ9BT76 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.32□□□□□ -2.36
UPK3BQ9BT76 SNORA27.1-201ENST00000362604 124 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 RNU6-1085P-201ENST00000363576 107 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 RNU4-41P-201ENST00000364426 143 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 RNU6-522P-201ENST00000364497 107 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 RNU6-945P-201ENST00000383947 107 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 RNU6-95P-201ENST00000384697 107 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 MIR216A-201ENST00000385063 110 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 MIR520G-201ENST00000385064 90 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 RNU6-648P-201ENST00000410190 107 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.31□□□□□ -2.36
UPK3BQ9BT76 AC018865.2-201ENST00000423631 129 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 AC092447.3-201ENST00000426027 686 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.31□□□□□ -2.36
UPK3BQ9BT76 MTND1P11-201ENST00000456661 876 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 CYCTP-201ENST00000504253 315 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 RNA5SP436-201ENST00000516020 115 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 RNU6-229P-201ENST00000516614 102 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.31□□□□□ -2.36
UPK3BQ9BT76 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.31□□□□□ -2.36
UPK3BQ9BT76 RN7SL793P-201ENST00000583259 296 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.31□□□□□ -2.36
UPK3BQ9BT76 AC027279.3-201ENST00000625055 122 ntBASIC0.31□□□□□ -2.36
UPK3BQ9BT76 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
UPK3BQ9BT76 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
UPK3BQ9BT76 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.3□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.393-201ENST00000383936 102 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 RNU6-1067P-201ENST00000384752 107 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 MIR452-201ENST00000385020 85 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 RNU1-119P-201ENST00000391122 165 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 RNA5SP193-201ENST00000410353 107 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC244023.1-201ENST00000426884 112 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 RPS20P10-201ENST00000451209 253 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.3□□□□□ -2.36
UPK3BQ9BT76 HMGN2P26-201ENST00000463169 339 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC046134.1-201ENST00000514454 666 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 ZNF519P2-201ENST00000557032 169 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AL158211.1-201ENST00000566763 763 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 MIR5696-201ENST00000578474 85 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC120024.3-201ENST00000603167 156 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC121247.2-201ENST00000604776 136 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC124303.1-201ENST00000605703 360 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC092954.2-201ENST00000609103 430 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC243829.6-201ENST00000612652 106 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 AC127459.3-201ENST00000624328 466 ntBASIC0.3□□□□□ -2.36
UPK3BQ9BT76 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.3□□□□□ -2.36
UPK3BQ9BT76 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
UPK3BQ9BT76 SNORD114-23-201ENST00000363536 72 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
UPK3BQ9BT76 RNU6-281P-201ENST00000384212 103 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 RNU6-1237P-201ENST00000384777 107 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 MIR520C-201ENST00000385005 87 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 RNU5A-5P-201ENST00000411054 116 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.29□□□□□ -2.36
UPK3BQ9BT76 USMG5P1-201ENST00000425964 177 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 AC098934.3-201ENST00000430450 190 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 AL137792.2-201ENST00000443484 235 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 AP003716.2-201ENST00000528260 108 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 AC011195.1-201ENST00000578177 177 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 MIR4273-201ENST00000582824 84 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 AC119751.7-201ENST00000600494 245 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 AC023510.2-201ENST00000622162 746 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 AL008636.1-201ENST00000625038 1018 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.29□□□□□ -2.36
UPK3BQ9BT76 AC073544.1-201ENST00000600110 1595 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 RNU6-1252P-201ENST00000363054 104 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 SNORA25.3-201ENST00000363205 127 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 RNU6-1264P-201ENST00000383891 107 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.405-201ENST00000383979 100 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.451-201ENST00000384200 100 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.524-201ENST00000384564 100 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 RNU6-136P-201ENST00000384663 107 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 Y_RNA.561-201ENST00000384694 100 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 SNORD111-201ENST00000408139 94 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 RNU6-994P-201ENST00000410507 111 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 RNA5SP222-201ENST00000411039 105 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 AL590632.1-201ENST00000424289 371 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 MTCYBP10-201ENST00000424905 650 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 PIGPP3-201ENST00000425307 415 ntBASIC0.28□□□□□ -2.36
UPK3BQ9BT76 MTATP6P13-201ENST00000438531 667 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms