Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.78□□□□□ -1.8
TRERF1Q96PN7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TRERF1Q96PN7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRERF1Q96PN7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRERF1Q96PN7 Y_RNA.219-201ENST00000364232 113 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 RNU6-1138P-201ENST00000365359 106 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 Y_RNA.362-201ENST00000365518 110 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRERF1Q96PN7 MIR181B1-201ENST00000385240 110 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 RNA5SP225-201ENST00000410874 135 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 RNU6-57P-201ENST00000411348 103 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 AC007064.1-201ENST00000412238 351 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 AC023449.1-201ENST00000454464 154 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 RNU6-221P-201ENST00000459541 99 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 RPL23AP67-201ENST00000465341 474 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 OR9P1P-201ENST00000496431 281 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 AC096725.1-201ENST00000514266 313 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.77□□□□□ -1.81
TRERF1Q96PN7 SNORD115-40-201ENST00000606510 82 ntBASIC3.77□□□□□ -1.81
TRERF1Q96PN7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRERF1Q96PN7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRERF1Q96PN7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRERF1Q96PN7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
TRERF1Q96PN7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRERF1Q96PN7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
TRERF1Q96PN7 RNU1-70P-201ENST00000362618 164 ntBASIC3.76□□□□□ -1.81
TRERF1Q96PN7 RNU6-805P-201ENST00000365643 106 ntBASIC3.76□□□□□ -1.81
TRERF1Q96PN7 RNU1-57P-201ENST00000384491 166 ntBASIC3.76□□□□□ -1.81
TRERF1Q96PN7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.76□□□□□ -1.81
TRERF1Q96PN7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.76□□□□□ -1.81
TRERF1Q96PN7 RNU6-1146P-201ENST00000516282 102 ntBASIC3.76□□□□□ -1.81
TRERF1Q96PN7 RNU6-1149P-201ENST00000516810 97 ntBASIC3.76□□□□□ -1.81
TRERF1Q96PN7 MIR4325-201ENST00000583049 90 ntBASIC3.76□□□□□ -1.81
TRERF1Q96PN7 AC107294.3-201ENST00000609211 526 ntBASIC3.76□□□□□ -1.81
TRERF1Q96PN7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TRERF1Q96PN7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.76□□□□□ -1.81
TRERF1Q96PN7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
TRERF1Q96PN7 AC017071.1-201ENST00000564407 2204 ntBASIC3.75□□□□□ -1.81
TRERF1Q96PN7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.75□□□□□ -1.81
TRERF1Q96PN7 AL117342.1-201ENST00000404861 406 ntBASIC3.75□□□□□ -1.81
TRERF1Q96PN7 RNU7-14P-201ENST00000459331 62 ntBASIC3.75□□□□□ -1.81
TRERF1Q96PN7 RNU7-23P-201ENST00000459465 62 ntBASIC3.75□□□□□ -1.81
TRERF1Q96PN7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.75□□□□□ -1.81
TRERF1Q96PN7 AC011406.1-201ENST00000512440 370 ntBASIC3.75□□□□□ -1.81
TRERF1Q96PN7 AC107934.2-201ENST00000518653 310 ntBASIC3.75□□□□□ -1.81
TRERF1Q96PN7 MIR5009-201ENST00000578736 100 ntBASIC3.75□□□□□ -1.81
TRERF1Q96PN7 MIR2681-201ENST00000581814 105 ntBASIC3.75□□□□□ -1.81
TRERF1Q96PN7 MIR3117-201ENST00000584034 78 ntBASIC3.75□□□□□ -1.81
TRERF1Q96PN7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.75□□□□□ -1.81
TRERF1Q96PN7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.75□□□□□ -1.81
TRERF1Q96PN7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRERF1Q96PN7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.75□□□□□ -1.81
TRERF1Q96PN7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRERF1Q96PN7 AC010680.1-201ENST00000590024 3590 ntBASIC3.74□□□□□ -1.81
TRERF1Q96PN7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TRERF1Q96PN7 AC093908.1-201ENST00000623125 8092 ntBASIC3.74□□□□□ -1.81
TRERF1Q96PN7 RNU6-228P-201ENST00000362700 106 ntBASIC3.74□□□□□ -1.81
TRERF1Q96PN7 AC018634.1-201ENST00000437554 401 ntBASIC3.74□□□□□ -1.81
TRERF1Q96PN7 AC006445.1-201ENST00000491925 405 ntBASIC3.74□□□□□ -1.81
TRERF1Q96PN7 SNORA64.4-201ENST00000516632 81 ntBASIC3.74□□□□□ -1.81
TRERF1Q96PN7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.74□□□□□ -1.81
TRERF1Q96PN7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.74□□□□□ -1.81
TRERF1Q96PN7 RPL17P51-201ENST00000605218 238 ntBASIC3.74□□□□□ -1.81
TRERF1Q96PN7 uc_338.1-201ENST00000612113 180 ntBASIC3.74□□□□□ -1.81
TRERF1Q96PN7 AL162274.2-201ENST00000614406 332 ntBASIC3.74□□□□□ -1.81
TRERF1Q96PN7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
TRERF1Q96PN7 SNORA50A-202ENST00000629536 136 ntBASIC3.74□□□□□ -1.81
TRERF1Q96PN7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.74□□□□□ -1.81
TRERF1Q96PN7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRERF1Q96PN7 AL021368.2-201ENST00000606125 5352 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 MAPK10-362ENST00000641864 4484 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRERF1Q96PN7 Y_RNA.342-201ENST00000365352 113 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 RNU6-975P-201ENST00000384296 105 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 MT-TI-201ENST00000387365 69 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 RNU6-750P-201ENST00000390946 107 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 AL441985.1-201ENST00000457727 251 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 RN7SL863P-201ENST00000462370 296 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 RNU6-113P-201ENST00000516653 101 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 SCARNA15-202ENST00000516881 127 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 RNU6-1270P-201ENST00000517128 108 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 AC068339.1-201ENST00000526965 141 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 AC141557.1-201ENST00000540982 400 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.73□□□□□ -1.81
TRERF1Q96PN7 MIR4662B-201ENST00000579498 81 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 MIR4753-201ENST00000585119 83 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 Y_RNA.818-201ENST00000618813 71 ntBASIC3.73□□□□□ -1.81
TRERF1Q96PN7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRERF1Q96PN7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRERF1Q96PN7 RNU6-1134P-201ENST00000365156 101 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 SNORD61-201ENST00000384252 73 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 RNU6-972P-201ENST00000391208 107 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 AC016909.1-201ENST00000415916 166 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 AC008134.1-201ENST00000420943 193 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 PGBD4P5-201ENST00000445958 426 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.72□□□□□ -1.81
TRERF1Q96PN7 S100A11P2-201ENST00000467589 312 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms