Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 Y_RNA.530-201ENST00000384587 101 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 SNORD12-201ENST00000391002 90 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 MTATP6P13-201ENST00000438531 667 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 RNU6-322P-201ENST00000516010 103 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 RNU7-172P-201ENST00000517125 64 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 AC134698.4-201ENST00000523451 826 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 RPL21P9-201ENST00000556149 474 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 AC004817.2-201ENST00000561794 651 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 NBR2-204ENST00000587322 63 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 AC009229.3-201ENST00000608056 282 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 AC006435.5-201ENST00000624486 112 ntBASIC0.79□□□□□ -2.28
USP47Q96K76 Y_RNA.267-201ENST00000364679 109 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 SNORA2.2-201ENST00000365473 135 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 Y_RNA.405-201ENST00000383979 100 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 Y_RNA.451-201ENST00000384200 100 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 RNU6-424P-201ENST00000384367 105 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 Y_RNA.524-201ENST00000384564 100 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 Y_RNA.561-201ENST00000384694 100 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.78□□□□□ -2.28
USP47Q96K76 HMGN2P26-201ENST00000463169 339 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.78□□□□□ -2.28
USP47Q96K76 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.78□□□□□ -2.28
USP47Q96K76 RNU7-12P-201ENST00000516030 62 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 RNA5SP395-201ENST00000516567 118 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.78□□□□□ -2.28
USP47Q96K76 AC026407.1-201ENST00000518369 204 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 AL590705.4-201ENST00000532209 134 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 AC068790.6-201ENST00000602558 258 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 AC022079.1-201ENST00000621546 602 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 AC068137.4-201ENST00000638485 296 ntBASIC0.78□□□□□ -2.28
USP47Q96K76 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
USP47Q96K76 AC005592.1-201ENST00000566527 1640 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 Y_RNA.38-201ENST00000362617 102 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 Y_RNA.212-201ENST00000364177 102 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 Y_RNA.256-201ENST00000364594 104 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 SNORD116-11-201ENST00000383882 92 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 SNORA80D-201ENST00000384488 135 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 Y_RNA.533-201ENST00000384596 114 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 RNU6-306P-201ENST00000384617 107 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 MIR92A1-201ENST00000385233 78 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
USP47Q96K76 MTATP6P17-201ENST00000431030 672 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 RNU7-66P-201ENST00000459469 62 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 OR9P1P-201ENST00000496431 281 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 RNA5SP476-201ENST00000516613 103 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 RNU6-229P-201ENST00000516614 102 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 RNU2-56P-201ENST00000516826 190 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 AL121579.1-201ENST00000555129 305 ntBASIC0.77□□□□□ -2.29
USP47Q96K76 Y_RNA.135-201ENST00000363439 95 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 RNU6-281P-201ENST00000384212 103 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 SNORA20B-201ENST00000384220 132 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 MTCO3P19-201ENST00000415864 321 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 AC243428.1-201ENST00000421099 264 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.76□□□□□ -2.29
USP47Q96K76 RPL39P39-201ENST00000455840 151 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 AC091021.1-201ENST00000468051 388 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 RPS26P48-201ENST00000491713 339 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 AC022493.2-201ENST00000506122 481 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 AC097462.1-201ENST00000514125 324 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 AC245008.1-201ENST00000608123 476 ntBASIC0.76□□□□□ -2.29
USP47Q96K76 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
USP47Q96K76 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
USP47Q96K76 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
USP47Q96K76 MIR1197-201ENST00000408818 88 ntBASIC0.75□□□□□ -2.29
USP47Q96K76 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.75□□□□□ -2.29
USP47Q96K76 PDCD5P2-201ENST00000507570 312 ntBASIC0.75□□□□□ -2.29
USP47Q96K76 Y_RNA.683-201ENST00000516508 93 ntBASIC0.75□□□□□ -2.29
USP47Q96K76 RNU7-28P-201ENST00000516759 62 ntBASIC0.75□□□□□ -2.29
USP47Q96K76 AC090142.3-201ENST00000519012 385 ntBASIC0.75□□□□□ -2.29
USP47Q96K76 AP002001.1-203ENST00000534002 267 ntBASIC0.75□□□□□ -2.29
USP47Q96K76 AL357312.1-201ENST00000603879 298 ntBASIC0.75□□□□□ -2.29
USP47Q96K76 Y_RNA.51-201ENST00000362725 102 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 RNY3P3-201ENST00000363816 102 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 RNU6-969P-201ENST00000383900 105 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 Y_RNA.414-201ENST00000384011 101 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 SNORD116-1-201ENST00000384335 95 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 MIR200A-201ENST00000384875 90 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.74□□□□□ -2.29
USP47Q96K76 AC104332.1-201ENST00000440471 797 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 RNU6-341P-201ENST00000516973 96 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
USP47Q96K76 SNORA1B-201ENST00000362535 133 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 RNU6-451P-201ENST00000362921 107 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 RNU6-407P-201ENST00000365280 104 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 MIR608-201ENST00000384820 100 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 MIR942-201ENST00000401111 86 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 USMG5P1-201ENST00000425964 177 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 MTND3P23-201ENST00000431980 347 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.73□□□□□ -2.29
USP47Q96K76 AC018710.1-201ENST00000506509 158 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 RNA5SP20-201ENST00000515976 84 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 RNU6-197P-201ENST00000516680 100 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 AC036111.3-201ENST00000526389 112 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 MIR5087-201ENST00000635826 76 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 MIR1321-201ENST00000637766 79 ntBASIC0.73□□□□□ -2.29
USP47Q96K76 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 Y_RNA.48-201ENST00000362710 103 ntBASIC0.72□□□□□ -2.29
USP47Q96K76 RNU6-595P-201ENST00000363944 107 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 355.6 ms