Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC105758.1-201ENST00000506038 399 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 AC023157.2-201ENST00000540596 141 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 MIR3684-201ENST00000579779 74 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 MIR6504-201ENST00000613520 61 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 AC040896.1-201ENST00000613819 479 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 AC006435.5-201ENST00000624486 112 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 MTND5P10-201ENST00000603719 1809 ntBASIC1.43□□□□□ -2.18
SNRNP40Q96DI7 ZNF209P-201ENST00000593450 2304 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 RNU6-1115P-201ENST00000362490 106 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 Y_RNA.187-201ENST00000363918 113 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 SNORD48-201ENST00000364953 64 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 MIR517C-201ENST00000385103 95 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 MT-TD-201ENST00000387419 68 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 MRPL42P3-201ENST00000401492 326 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AC114482.1-201ENST00000418010 247 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AC099799.1-201ENST00000439809 192 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 MRPS10P1-201ENST00000448483 130 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 PCNPP5-201ENST00000452246 481 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AL161670.1-201ENST00000554348 137 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 RPL21P9-201ENST00000556149 474 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 MIR4421-201ENST00000578133 69 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AL117336.2-201ENST00000602435 335 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 Y_RNA.804-201ENST00000615262 101 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AC084781.2-201ENST00000615568 161 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AC091925.1-201ENST00000623204 462 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AC138305.3-201ENST00000624988 240 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 U6.108-201ENST00000637764 58 ntBASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.42□□□□□ -2.18
SNRNP40Q96DI7 RNU4-73P-201ENST00000363164 141 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 Y_RNA.463-201ENST00000384271 102 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 AL034345.1-201ENST00000407768 123 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 RNA5SP475-201ENST00000410568 110 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 RN7SKP101-201ENST00000411376 320 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 SNX2P2-201ENST00000424553 323 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 SNORA40.9-201ENST00000515895 93 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 RNU6-911P-201ENST00000516523 104 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 AC018448.1-201ENST00000552843 316 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 AC015688.6-201ENST00000577737 104 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 MIR8054-201ENST00000620877 86 ntBASIC1.41□□□□□ -2.18
SNRNP40Q96DI7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 RNU4-79P-201ENST00000362764 141 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 RNY3P11-201ENST00000364153 102 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 RNU6-407P-201ENST00000365280 104 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 RNY3P4-201ENST00000384428 101 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 RNU6-440P-201ENST00000390882 105 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 RPS20P15-201ENST00000412792 311 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AC236972.2-201ENST00000434979 310 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AC027119.1-201ENST00000440877 241 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AL606517.2-201ENST00000442855 241 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 HMGN1P7-201ENST00000491722 313 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 RNU6-699P-201ENST00000517081 110 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 RNU7-128P-201ENST00000517247 62 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AC144568.1-201ENST00000520139 137 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AP002001.1-203ENST00000534002 267 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 RAB11AP2-201ENST00000545905 639 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AL442163.3-201ENST00000554110 156 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 SNORA4-201ENST00000584302 138 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AC022217.4-201ENST00000604389 163 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AL021879.1-201ENST00000611756 288 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AL157834.3-201ENST00000615543 103 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AL008636.1-201ENST00000625038 1018 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 AL161722.3-201ENST00000605789 2983 ntBASIC1.4□□□□□ -2.19
SNRNP40Q96DI7 MIR302D-201ENST00000362275 68 ntBASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 MIR1323-201ENST00000408090 73 ntBASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 SNORD12B-201ENST00000410433 91 ntBASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 RPS27P1-201ENST00000450552 247 ntBASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 RNU6-625P-201ENST00000459412 107 ntBASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 RNU7-169P-201ENST00000459456 61 ntBASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 RNU7-172P-201ENST00000517125 64 ntBASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 MIR4795-201ENST00000584182 89 ntBASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 AC073413.2-201ENST00000604332 360 ntBASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 AC021506.2-201ENST00000612354 169 ntBASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SNRNP40Q96DI7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.58-201ENST00000362807 102 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.146-201ENST00000363549 102 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms