Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 FAM71BP1-201ENST00000604431 523 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 GHRLOS.1-201ENST00000610995 70 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 AC002553.4-201ENST00000616896 331 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 U6.115-201ENST00000636045 103 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 AC005592.1-201ENST00000566527 1640 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 SNORA1B-201ENST00000362535 133 ntBASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 RNU6-199P-201ENST00000362954 107 ntBASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 Y_RNA.86-201ENST00000363020 111 ntBASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 MIR548F5-201ENST00000408421 86 ntBASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 AL139396.1-201ENST00000421137 167 ntBASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 AL137792.2-201ENST00000443484 235 ntBASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 SNORA31.2-201ENST00000516019 134 ntBASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 RNU6-718P-201ENST00000516166 105 ntBASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 AC007014.2-201ENST00000615581 479 ntBASIC0.94□□□□□ -2.26
CCDC65Q8IXS2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AC073544.1-201ENST00000600110 1595 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 MIR337-201ENST00000362281 93 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 RNY1P16-201ENST00000363063 111 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 Y_RNA.404-201ENST00000383978 102 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 MIR19B1-201ENST00000384829 87 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 MIR1277-201ENST00000408536 78 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AC074085.1-201ENST00000413598 418 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 RPS3AP52-201ENST00000435639 297 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 UQCRBP2-201ENST00000447827 297 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 PCNPP5-201ENST00000452246 481 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AC093850.1-201ENST00000454121 251 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AC105758.1-201ENST00000506038 399 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AC074133.1-201ENST00000515696 183 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AF235103.2-201ENST00000525753 346 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AC090049.2-201ENST00000550377 109 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AC018448.1-201ENST00000552843 316 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 MIR4698-201ENST00000577795 80 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AC013244.2-201ENST00000603396 103 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 SNORA28-201ENST00000606769 126 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 AC093913.1-201ENST00000614178 329 ntBASIC0.93□□□□□ -2.26
CCDC65Q8IXS2 Y_RNA.2-201ENST00000362330 96 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 RNU4-79P-201ENST00000362764 141 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 Y_RNA.124-201ENST00000363339 93 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 RNU6-593P-201ENST00000364716 112 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 MIR146A-201ENST00000385201 99 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 RNU6-510P-201ENST00000391239 108 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 MTCYBP4-201ENST00000401524 249 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 MTND3P8-201ENST00000412909 339 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 AC245047.7-201ENST00000440265 293 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 Z98949.2-201ENST00000440996 144 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 RPL7P42-201ENST00000481005 679 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 RPS26P48-201ENST00000491713 339 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 RNA5SP102-201ENST00000516865 106 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 SNORA70.22-201ENST00000517160 124 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 MIR3973-201ENST00000579824 107 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 AL117336.2-201ENST00000602435 335 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 AL020996.3-201ENST00000606617 222 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 AC104260.1-201ENST00000616660 539 ntBASIC0.92□□□□□ -2.26
CCDC65Q8IXS2 Y_RNA.265-201ENST00000364677 108 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 Y_RNA.267-201ENST00000364679 109 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 RNU6-407P-201ENST00000365280 104 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 RNU6-910P-201ENST00000390844 107 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 RNU11-5P-201ENST00000391216 129 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 MTCYBP10-201ENST00000424905 650 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 AL353997.1-201ENST00000432936 108 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 RPS4XP11-201ENST00000446897 772 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 MTND3P10-201ENST00000450967 341 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 RNU6-1291P-201ENST00000516591 104 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 MIR3684-201ENST00000579779 74 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 MIR4653-201ENST00000585107 83 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 AC009229.3-201ENST00000608056 282 ntBASIC0.91□□□□□ -2.26
CCDC65Q8IXS2 RNU6-879P-201ENST00000364328 108 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 Y_RNA.243-201ENST00000364481 109 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 SNORA2.2-201ENST00000365473 135 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 Y_RNA.361-201ENST00000365515 120 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 snoU13.25-201ENST00000458945 104 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 RNU7-87P-201ENST00000459343 62 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 AL049830.1-201ENST00000468034 425 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 AC022493.2-201ENST00000506122 481 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 SNORD79.1-201ENST00000516069 84 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 RNU7-28P-201ENST00000516759 62 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
CCDC65Q8IXS2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms