Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RNU6-856P-201ENST00000516959 98 ntBASIC1.69□□□□□ -2.14
LRRTM1Q86UE6 RNU2-19P-201ENST00000517288 84 ntBASIC1.69□□□□□ -2.14
LRRTM1Q86UE6 AC027419.1-201ENST00000522976 328 ntBASIC1.69□□□□□ -2.14
LRRTM1Q86UE6 MIR3169-201ENST00000578032 83 ntBASIC1.69□□□□□ -2.14
LRRTM1Q86UE6 AC008749.1-201ENST00000597650 306 ntBASIC1.69□□□□□ -2.14
LRRTM1Q86UE6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRTM1Q86UE6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.69□□□□□ -2.14
LRRTM1Q86UE6 SNORA33-201ENST00000363664 130 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 RNA5SP493-201ENST00000364115 91 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.243-201ENST00000364481 109 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 MIR597-201ENST00000384968 97 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 RNU4-53P-201ENST00000410828 140 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 RNU5A-5P-201ENST00000411054 116 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 AL357134.1-201ENST00000445848 426 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 SNORD65B-201ENST00000459126 73 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 AC114982.1-201ENST00000469402 321 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 SEPT14P8-201ENST00000508026 178 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 RNU6-436P-201ENST00000516171 114 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 DEFB117-201ENST00000602356 141 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.15-201ENST00000611544 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.16-201ENST00000613119 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.12-201ENST00000613778 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.20-201ENST00000613956 192 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.9-201ENST00000615427 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.11-201ENST00000616345 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.2-201ENST00000616535 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.3-201ENST00000617785 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.19-201ENST00000618602 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 RNU2-1-201ENST00000618664 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.6-201ENST00000619225 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.5-201ENST00000619465 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 U2.10-201ENST00000620268 191 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 MIR6873-201ENST00000622788 63 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 AC127459.3-201ENST00000624328 466 ntBASIC1.68□□□□□ -2.14
LRRTM1Q86UE6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 RNU4-90P-201ENST00000362773 141 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.65-201ENST00000362846 100 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 RNU6-290P-201ENST00000365212 101 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.383-201ENST00000383855 97 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 RNU6-1310P-201ENST00000384153 107 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 SNORA20B-201ENST00000384220 132 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 RNU6-21P-201ENST00000384710 107 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.569-201ENST00000384749 103 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 MIR1283-2-201ENST00000408621 87 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 AL135790.2-201ENST00000437701 267 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 SERF1AP1-201ENST00000514575 187 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 RNU6-1023P-201ENST00000516137 106 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 RNU6-1041P-201ENST00000516254 102 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 MIR4529-201ENST00000578110 78 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 MIR4513-201ENST00000581077 86 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 AC005828.6-201ENST00000606610 232 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 SNORD113-5-201ENST00000607261 78 ntBASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LRRTM1Q86UE6 AL159152.1-201ENST00000635019 2587 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 MIR335-201ENST00000362173 94 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 RNU6-1266P-201ENST00000362794 105 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.76-201ENST00000362931 109 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.172-201ENST00000363765 102 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.269-201ENST00000364685 89 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 SNORA20.1-201ENST00000364790 130 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.287-201ENST00000364853 94 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.329-201ENST00000365209 107 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.361-201ENST00000365515 120 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 Y_RNA.416-201ENST00000384014 113 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 AL031003.1-201ENST00000404229 172 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 RNU2-2P-201ENST00000410396 191 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 MTCO1P5-201ENST00000433573 344 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 AL121890.1-201ENST00000435457 205 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 AC005042.3-201ENST00000453230 174 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 RNU6-794P-201ENST00000517261 64 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 AC007229.1-201ENST00000590455 412 ntBASIC1.66□□□□□ -2.14
LRRTM1Q86UE6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 RNU4-80P-201ENST00000363200 141 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 Y_RNA.257-201ENST00000364596 102 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 RNU6-740P-201ENST00000364734 105 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 RNU6-662P-201ENST00000384253 104 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 SNORA67.3-201ENST00000384366 140 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 Y_RNA.489-201ENST00000384410 101 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 RNU6-160P-201ENST00000384591 107 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 SNORA64-201ENST00000384674 134 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 MIR17-201ENST00000385012 84 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 MIR29C-201ENST00000385231 88 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 SNORA40.19-201ENST00000390846 128 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 AL117342.1-201ENST00000404861 406 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 RNA5SP450-201ENST00000411206 102 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 AC099677.2-201ENST00000436385 175 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 HMGN2P34-201ENST00000437647 269 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 AC245102.2-201ENST00000448956 180 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 AC011406.1-201ENST00000512440 370 ntBASIC1.65□□□□□ -2.15
LRRTM1Q86UE6 RNU2-34P-201ENST00000516534 121 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms