Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 U2.11-201ENST00000616345 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 U2.2-201ENST00000616535 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 U2.3-201ENST00000617785 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 U2.19-201ENST00000618602 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 RNU2-1-201ENST00000618664 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 U2.6-201ENST00000619225 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 U2.5-201ENST00000619465 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 U2.10-201ENST00000620268 191 ntBASIC3.09□□□□□ -1.91
RUFY4Q6ZNE9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.09□□□□□ -1.92
RUFY4Q6ZNE9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-743P-201ENST00000364151 106 ntBASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-275P-201ENST00000364910 107 ntBASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 U8.7-201ENST00000364940 136 ntBASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-991P-201ENST00000516168 107 ntBASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-667P-201ENST00000517186 102 ntBASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 MIR3144-201ENST00000579460 79 ntBASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 MIR4724-201ENST00000579485 89 ntBASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 MIR4744-201ENST00000581563 82 ntBASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 AL391903.3-201ENST00000612158 163 ntBASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 AC068647.2-201ENST00000637380 353 ntBASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.08□□□□□ -1.92
RUFY4Q6ZNE9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.172-201ENST00000363765 102 ntBASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-117P-201ENST00000365415 107 ntBASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 SNORA25B-201ENST00000365507 128 ntBASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 MIR616-201ENST00000385293 97 ntBASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.580-201ENST00000391004 95 ntBASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 EBAG9P1-201ENST00000418955 543 ntBASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 TRBV12-1-201ENST00000479785 344 ntBASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.797-201ENST00000515977 94 ntBASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-406P-201ENST00000516470 107 ntBASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 AC127455.1-201ENST00000565496 145 ntBASIC3.07□□□□□ -1.92
RUFY4Q6ZNE9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 RNU1-35P-201ENST00000362782 153 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.99-201ENST00000363138 105 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.182-201ENST00000363880 111 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 RNA5SP125-201ENST00000364843 120 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.412-201ENST00000384001 104 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 SNORD116-13-201ENST00000384408 92 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.506-201ENST00000384494 102 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 MIR592-201ENST00000384959 97 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 RNU11-5P-201ENST00000391216 129 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 SNORA36B-201ENST00000410438 131 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 AL135786.1-201ENST00000415892 214 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 RPS27P22-201ENST00000478056 241 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 RN7SKP282-201ENST00000516824 299 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 POLR3GP1-201ENST00000594073 261 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 U2.20-201ENST00000613956 192 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 AC021753.1-201ENST00000635724 168 ntBASIC3.06□□□□□ -1.92
RUFY4Q6ZNE9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 AL356292.1-201ENST00000283110 373 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 MIR340-201ENST00000362125 95 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 MIR367-201ENST00000362299 68 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.170-201ENST00000363746 110 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.357-201ENST00000365487 109 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-125P-201ENST00000384505 107 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 MIR1253-201ENST00000408273 105 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 MIR1261-201ENST00000408659 82 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 RNA5SP21-201ENST00000410917 96 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 AC092427.1-202ENST00000430569 476 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 AL162725.1-201ENST00000435405 301 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 AC009238.1-201ENST00000442165 424 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 AC009237.6-201ENST00000446969 424 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 AC117454.1-201ENST00000491120 168 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 MIR3133-201ENST00000583157 78 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 MTND1P7-201ENST00000632801 297 ntBASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RUFY4Q6ZNE9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 AC068700.1-201ENST00000565862 3754 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.24-201ENST00000362508 103 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-859P-201ENST00000362728 107 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 RNU1-22P-201ENST00000363334 158 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-674P-201ENST00000363831 107 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-969P-201ENST00000383900 105 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 RNY3P5-201ENST00000384127 102 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 MIR512-1-201ENST00000384913 84 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 MIR9-1-201ENST00000385198 89 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-578P-201ENST00000390980 103 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 EDDM3CP-201ENST00000415977 425 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 AL353689.1-201ENST00000438895 199 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 RNU1-131P-201ENST00000458943 161 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 RN7SL297P-201ENST00000483161 293 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 AC097462.1-201ENST00000514125 324 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 RNU7-200P-201ENST00000516105 62 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-826P-201ENST00000516827 104 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 AC027419.1-201ENST00000522976 328 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 1708.4 ms