Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 RPL23AP36-201ENST00000413895 458 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 AL135790.2-201ENST00000437701 267 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 DYNLT3P2-201ENST00000442517 295 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 RN7SL429P-201ENST00000479090 223 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 RN7SL489P-201ENST00000486185 223 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 RN7SL327P-201ENST00000488659 223 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 RNU7-99P-201ENST00000516271 62 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 AP003733.2-201ENST00000529409 171 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 MIR3145-201ENST00000580727 82 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 RN7SL853P-201ENST00000617250 223 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 MIRLET7G-201ENST00000362280 84 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 Y_RNA.418-201ENST00000384029 102 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 Y_RNA.541-201ENST00000384640 113 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 RNA5SP508-201ENST00000411327 119 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 SEPT14P8-201ENST00000508026 178 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 RNA5SP320-201ENST00000516263 124 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-1337P-201ENST00000516525 95 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-635P-201ENST00000516651 102 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 AC022217.4-201ENST00000604389 163 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 PRR13P7-201ENST00000605538 430 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 AC067747.1-201ENST00000608026 250 ntBASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.26□□□□□ -2.05
PPP4R4Q6NUP7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 AL356292.1-201ENST00000283110 373 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 RNU4-82P-201ENST00000362443 140 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 Y_RNA.133-201ENST00000363428 110 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-324P-201ENST00000363957 106 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 SNORD114-30-201ENST00000364448 72 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 RNU4-52P-201ENST00000384209 138 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 Y_RNA.459-201ENST00000384251 102 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 SNORD116-13-201ENST00000384408 92 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 HMGN2P38-201ENST00000423806 265 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 AC090255.1-201ENST00000495779 349 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-63P-201ENST00000516690 95 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 RNU7-172P-201ENST00000517125 64 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 AC073413.2-201ENST00000604332 360 ntBASIC2.25□□□□□ -2.05
PPP4R4Q6NUP7 Y_RNA.383-201ENST00000383855 97 ntBASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 MIR27B-201ENST00000385129 97 ntBASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-360P-201ENST00000390944 104 ntBASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 RNA5SP109-201ENST00000391010 116 ntBASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 HSPE1P9-201ENST00000440046 311 ntBASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 AC008413.1-201ENST00000511864 177 ntBASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-1045P-201ENST00000516321 107 ntBASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 RNU1-142P-201ENST00000516682 145 ntBASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 RNA5SP481-201ENST00000516814 122 ntBASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 U4.3-201ENST00000621047 82 ntBASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
PPP4R4Q6NUP7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 Y_RNA.84-201ENST00000363011 104 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-1309P-201ENST00000363305 108 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 RNA5SP126-201ENST00000365092 109 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 RNA5SP37-201ENST00000365420 130 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 Y_RNA.574-201ENST00000384766 95 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 RNA5SP323-201ENST00000391094 133 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 AL135786.1-201ENST00000415892 214 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 HSPE1P13-201ENST00000451143 297 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-1143P-201ENST00000516125 104 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 AC021269.2-201ENST00000532318 330 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 AC091178.2-201ENST00000584401 117 ntBASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
PPP4R4Q6NUP7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 Y_RNA.16-201ENST00000362421 102 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 RNU4-90P-201ENST00000362773 141 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 RNU4-80P-201ENST00000363200 141 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-290P-201ENST00000365212 101 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 SNORA4.2-201ENST00000365313 147 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-472P-201ENST00000384299 107 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 MIR568-201ENST00000385036 95 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 RNU2-7P-201ENST00000410794 178 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 HMGN1P10-201ENST00000474557 553 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 AC008269.2-201ENST00000561915 1105 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 AC004832.4-201ENST00000608952 331 ntBASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PPP4R4Q6NUP7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 Y_RNA.136-201ENST00000363444 102 ntBASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 RNU6-439P-201ENST00000384188 106 ntBASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 SNORA12.1-201ENST00000390873 148 ntBASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 POLR2KP2-201ENST00000438155 177 ntBASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.21□□□□□ -2.06
PPP4R4Q6NUP7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 259.8 ms