Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 RNU6-462P-201ENST00000362659 105 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 SNORD114-14-201ENST00000362723 75 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 RNU6-873P-201ENST00000363833 107 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 RNU6-1322P-201ENST00000364309 107 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 MIR320B2-201ENST00000408479 138 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1□□□□□ -2.57
NUP188Q5SRE5 AC137499.1-201ENST00000427602 88 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 AC015818.7-201ENST00000428754 109 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1□□□□□ -2.57
NUP188Q5SRE5 AC087499.7-201ENST00000441958 109 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 RNU7-51P-201ENST00000516560 62 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 AC026470.2-201ENST00000561492 181 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 MIR3165-201ENST00000579874 75 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 AC008521.1-201ENST00000587471 187 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 MIR7107-201ENST00000611489 80 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 uc_338.4-201ENST00000616635 176 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 MTND4P9-201ENST00000507819 1346 ntBASIC-1□□□□□ -2.57
NUP188Q5SRE5 MIR365A-201ENST00000362260 87 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 SNORD114-11-201ENST00000363738 75 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AL355143.1-201ENST00000407101 841 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 ZNF114P1-201ENST00000453500 292 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AC010486.3-201ENST00000511602 785 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AC010493.1-201ENST00000513479 292 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AC097462.1-201ENST00000514125 324 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 RNA5SP216-201ENST00000516111 123 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 MIR5706-201ENST00000579841 80 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 U4.2-201ENST00000618561 85 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 USP9YP25-201ENST00000457708 443 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AP001836.1-201ENST00000604675 523 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AC023158.2-201ENST00000614876 543 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AC078880.5-201ENST00000617845 421 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 AC006435.5-201ENST00000624486 112 ntBASIC-1.01□□□□□ -2.57
NUP188Q5SRE5 SNORD68-201ENST00000363214 84 ntBASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 RNU6-137P-201ENST00000363680 108 ntBASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 SNORD83B-201ENST00000386745 93 ntBASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 AL358944.1-201ENST00000528537 144 ntBASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 AC090617.3-201ENST00000573670 475 ntBASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 MIR544B-201ENST00000582372 78 ntBASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 AL445523.1-201ENST00000451184 1362 ntBASIC-1.02□□□□□ -2.57
NUP188Q5SRE5 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.03□□□□□ -2.57
NUP188Q5SRE5 AL158053.1-201ENST00000441503 453 ntBASIC-1.03□□□□□ -2.57
NUP188Q5SRE5 SPINT5P-201ENST00000448174 155 ntBASIC-1.03□□□□□ -2.57
NUP188Q5SRE5 AC010424.1-201ENST00000506336 297 ntBASIC-1.03□□□□□ -2.57
NUP188Q5SRE5 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.03□□□□□ -2.57
NUP188Q5SRE5 RNU6-430P-201ENST00000517078 107 ntBASIC-1.03□□□□□ -2.57
NUP188Q5SRE5 AC120024.3-201ENST00000603167 156 ntBASIC-1.03□□□□□ -2.57
NUP188Q5SRE5 MIR6514-201ENST00000622549 70 ntBASIC-1.03□□□□□ -2.57
NUP188Q5SRE5 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.03□□□□□ -2.58
NUP188Q5SRE5 RNU6-205P-201ENST00000390858 107 ntBASIC-1.03□□□□□ -2.58
NUP188Q5SRE5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.03□□□□□ -2.58
NUP188Q5SRE5 AC091885.1-201ENST00000506658 268 ntBASIC-1.03□□□□□ -2.58
NUP188Q5SRE5 AC006600.1-201ENST00000572529 153 ntBASIC-1.03□□□□□ -2.58
NUP188Q5SRE5 AC016911.1-201ENST00000613297 452 ntBASIC-1.03□□□□□ -2.58
NUP188Q5SRE5 MIR655-201ENST00000362159 97 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 RNU6-61P-201ENST00000365528 109 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 MTND1P14-201ENST00000427400 950 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 AL358934.1-201ENST00000432346 324 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 SNORD123-201ENST00000459473 70 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 AC046134.1-201ENST00000514454 666 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 RNU7-172P-201ENST00000517125 64 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 AC121334.2-201ENST00000605387 271 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 AL139022.2-201ENST00000606934 443 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 SNORA43.4-201ENST00000629559 138 ntBASIC-1.04□□□□□ -2.58
NUP188Q5SRE5 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.05□□□□□ -2.58
NUP188Q5SRE5 SNORD45.3-201ENST00000363836 72 ntBASIC-1.05□□□□□ -2.58
NUP188Q5SRE5 RNU6-207P-201ENST00000384137 107 ntBASIC-1.05□□□□□ -2.58
NUP188Q5SRE5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.05□□□□□ -2.58
NUP188Q5SRE5 AC114878.1-201ENST00000441166 358 ntBASIC-1.05□□□□□ -2.58
NUP188Q5SRE5 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.05□□□□□ -2.58
NUP188Q5SRE5 RNU7-185P-201ENST00000459215 60 ntBASIC-1.05□□□□□ -2.58
NUP188Q5SRE5 RNA5SP54-201ENST00000516951 92 ntBASIC-1.05□□□□□ -2.58
NUP188Q5SRE5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.05□□□□□ -2.58
NUP188Q5SRE5 MIR6738-201ENST00000619620 64 ntBASIC-1.05□□□□□ -2.58
NUP188Q5SRE5 MIR377-201ENST00000362145 69 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 RNU6-354P-201ENST00000383862 107 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 RNU6-190P-201ENST00000384154 102 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 RNU6-610P-201ENST00000384264 107 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 RNU6-480P-201ENST00000384332 107 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 MIR501-201ENST00000390204 84 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 AL365184.2-201ENST00000431139 435 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 RNU6-201P-201ENST00000517100 61 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 RNA5SP454-201ENST00000517231 127 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 MIR378F-201ENST00000578143 78 ntBASIC-1.06□□□□□ -2.58
NUP188Q5SRE5 MIR3152-201ENST00000579801 74 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms