Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC008269.2-201ENST00000561915 1105 ntBASIC2.01□□□□□ -2.09
RUNDC3AQ59EK9 MIR3145-201ENST00000580727 82 ntBASIC2.01□□□□□ -2.09
RUNDC3AQ59EK9 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.01□□□□□ -2.09
RUNDC3AQ59EK9 AL359075.3-201ENST00000613288 217 ntBASIC2.01□□□□□ -2.09
RUNDC3AQ59EK9 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
RUNDC3AQ59EK9 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.01□□□□□ -2.09
RUNDC3AQ59EK9 MIR6132-201ENST00000622083 109 ntBASIC2.01□□□□□ -2.09
RUNDC3AQ59EK9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.01□□□□□ -2.09
RUNDC3AQ59EK9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
RUNDC3AQ59EK9 Y_RNA.133-201ENST00000363428 110 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 RNU6-117P-201ENST00000365415 107 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 SNORA8-201ENST00000384574 139 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 Y_RNA.541-201ENST00000384640 113 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 AL512604.1-201ENST00000404812 257 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 AL158823.1-201ENST00000418441 478 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 RPS26P45-201ENST00000471748 340 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 AC010409.1-201ENST00000487382 476 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2□□□□□ -2.09
RUNDC3AQ59EK9 AC084364.2-201ENST00000546924 395 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 AC131280.1-202ENST00000624067 4211 ntBASIC2□□□□□ -2.09
RUNDC3AQ59EK9 RNU4-90P-201ENST00000362773 141 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 RNU6-238P-201ENST00000363313 106 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 RNU6-112P-201ENST00000363599 104 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 RNU6-1019P-201ENST00000364424 107 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 Y_RNA.383-201ENST00000383855 97 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 MIR17-201ENST00000385012 84 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 RNA5SP323-201ENST00000391094 133 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 TRBV12-1-201ENST00000479785 344 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 SNORA70.12-201ENST00000516084 153 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 RNU7-99P-201ENST00000516271 62 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 RNU7-172P-201ENST00000517125 64 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 AC024995.1-201ENST00000523014 93 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 MIR4435-1-201ENST00000582552 80 ntBASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
RUNDC3AQ59EK9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 AL356292.1-201ENST00000283110 373 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 Y_RNA.84-201ENST00000363011 104 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 RNU6-290P-201ENST00000365212 101 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 Y_RNA.418-201ENST00000384029 102 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 RNU6-296P-201ENST00000384608 107 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 POLR2KP2-201ENST00000438155 177 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 AL163195.1-201ENST00000496941 348 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 RNU6-1337P-201ENST00000516525 95 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 RNU1-142P-201ENST00000516682 145 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 MIR4287-201ENST00000579398 78 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 AC073413.2-201ENST00000604332 360 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 AC008555.8-201ENST00000623602 2168 ntBASIC1.98□□□□□ -2.09
RUNDC3AQ59EK9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 Y_RNA.172-201ENST00000363765 102 ntBASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 SNORA63D-201ENST00000364359 132 ntBASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 RNU6-713P-201ENST00000384761 107 ntBASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 AL606517.2-201ENST00000442855 241 ntBASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 RNU6-63P-201ENST00000516690 95 ntBASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 RNU6-570P-201ENST00000517051 105 ntBASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 RNA5SP437-201ENST00000517249 129 ntBASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.97□□□□□ -2.09
RUNDC3AQ59EK9 Y_RNA.16-201ENST00000362421 102 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.47-201ENST00000362697 108 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 RNU4-80P-201ENST00000363200 141 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.176-201ENST00000363815 109 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.376-201ENST00000365638 108 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 SNORD116-13-201ENST00000384408 92 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 RNU4-53P-201ENST00000410828 140 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 AC009310.1-201ENST00000414414 451 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 AL135790.2-201ENST00000437701 267 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 RPS27P1-201ENST00000450552 247 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 HSPE1P13-201ENST00000451143 297 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 RPL23AP63-201ENST00000498752 471 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 AL773524.1-201ENST00000614065 229 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 MIR8062-201ENST00000621515 85 ntBASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.149-201ENST00000363558 117 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.569-201ENST00000384749 103 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 MIR568-201ENST00000385036 95 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 RNU6-1203P-201ENST00000410703 110 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 AC244636.1-201ENST00000421152 228 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 MTCYBP9-201ENST00000431021 303 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 HMGN1P10-201ENST00000474557 553 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 MTCO2P24-201ENST00000515611 426 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 SNORA31.17-201ENST00000516953 127 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms