Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNA5SP475-201ENST00000410568 110 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.04□□□□□ -2.24
RAB40BQ12829 AC092473.1-201ENST00000441098 221 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.04□□□□□ -2.24
RAB40BQ12829 Y_RNA.638-201ENST00000459374 113 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 AL133373.1-201ENST00000497098 94 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 RNU6-1278P-201ENST00000516130 107 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 RNU7-40P-201ENST00000516397 64 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 RNU6-1213P-201ENST00000517075 94 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 MTND4LP26-201ENST00000518144 282 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 MIR4498-201ENST00000577599 66 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 AC016727.1-205ENST00000605437 569 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 U6.115-201ENST00000636045 103 ntBASIC1.04□□□□□ -2.24
RAB40BQ12829 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
RAB40BQ12829 MIR410-201ENST00000362222 80 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 RNU6-845P-201ENST00000362578 103 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 RNU6-939P-201ENST00000384634 107 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 RPL23AP36-201ENST00000413895 458 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 AC114482.1-201ENST00000418010 247 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.03□□□□□ -2.24
RAB40BQ12829 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.03□□□□□ -2.24
RAB40BQ12829 Y_RNA.635-201ENST00000459041 101 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 MIR2053-201ENST00000459295 91 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 MTND4P17-201ENST00000470444 350 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 AC108729.3-201ENST00000513484 108 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 RNA5SP168-201ENST00000516642 112 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 RNU6-341P-201ENST00000516973 96 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 AP002001.1-203ENST00000534002 267 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.03□□□□□ -2.24
RAB40BQ12829 AC098679.4-201ENST00000624241 654 ntBASIC1.03□□□□□ -2.24
RAB40BQ12829 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RAB40BQ12829 AL391987.6-201ENST00000305671 199 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 SNORA1B-201ENST00000362535 133 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 RNU6-199P-201ENST00000362954 107 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 RNU6-99P-201ENST00000364721 107 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 Y_RNA.279-201ENST00000364763 95 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 Y_RNA.338-201ENST00000365320 114 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 RNU6-424P-201ENST00000384367 105 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 MIR618-201ENST00000385287 98 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 RNU6-876P-201ENST00000391295 104 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 MIR873-201ENST00000401120 77 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 SNORD12B-201ENST00000410433 91 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.02□□□□□ -2.25
RAB40BQ12829 CALM2P4-201ENST00000430810 426 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 DYNLT3P2-201ENST00000442517 295 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 AL137792.2-201ENST00000443484 235 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 RNU6-1291P-201ENST00000516591 104 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 RNU6-165P-201ENST00000517170 99 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 AP002004.2-201ENST00000531656 154 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.02□□□□□ -2.25
RAB40BQ12829 AL513534.2-201ENST00000603836 250 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 AL353770.2-201ENST00000620024 78 ntBASIC1.02□□□□□ -2.25
RAB40BQ12829 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.02□□□□□ -2.25
RAB40BQ12829 RNU6-1301P-201ENST00000362724 104 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 Y_RNA.124-201ENST00000363339 93 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 Y_RNA.166-201ENST00000363730 102 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 RNU6-454P-201ENST00000364292 107 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.01□□□□□ -2.25
RAB40BQ12829 U8.16-201ENST00000391279 133 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 RNU4-14P-201ENST00000410858 122 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.01□□□□□ -2.25
RAB40BQ12829 Y_RNA.691-201ENST00000516611 103 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 RNU7-28P-201ENST00000516759 62 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 MIR2355-201ENST00000517199 87 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.01□□□□□ -2.25
RAB40BQ12829 AC091178.2-201ENST00000584401 117 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 AC092794.1-201ENST00000612734 582 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 AL157834.3-201ENST00000615543 103 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 AC127459.3-201ENST00000624328 466 ntBASIC1.01□□□□□ -2.25
RAB40BQ12829 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RAB40BQ12829 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.01□□□□□ -2.25
RAB40BQ12829 Y_RNA.248-201ENST00000364501 109 ntBASIC1□□□□□ -2.25
RAB40BQ12829 RNU6-1310P-201ENST00000384153 107 ntBASIC1□□□□□ -2.25
RAB40BQ12829 SNORA25-201ENST00000384384 134 ntBASIC1□□□□□ -2.25
RAB40BQ12829 Y_RNA.619-201ENST00000410951 90 ntBASIC1□□□□□ -2.25
RAB40BQ12829 RNU6-370P-201ENST00000411008 104 ntBASIC1□□□□□ -2.25
RAB40BQ12829 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1□□□□□ -2.25
RAB40BQ12829 SUMO1P2-201ENST00000452524 304 ntBASIC1□□□□□ -2.25
RAB40BQ12829 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1□□□□□ -2.25
RAB40BQ12829 OR9P1P-201ENST00000496431 281 ntBASIC1□□□□□ -2.25
RAB40BQ12829 RNU6-1053P-201ENST00000515930 101 ntBASIC1□□□□□ -2.25
RAB40BQ12829 RNU6-264P-201ENST00000517134 104 ntBASIC1□□□□□ -2.25
RAB40BQ12829 AL359821.1-201ENST00000605519 182 ntBASIC1□□□□□ -2.25
RAB40BQ12829 AC005828.6-201ENST00000606610 232 ntBASIC1□□□□□ -2.25
RAB40BQ12829 GHRLOS.1-201ENST00000610995 70 ntBASIC1□□□□□ -2.25
RAB40BQ12829 TPTEP1-208ENST00000636884 213 ntBASIC1□□□□□ -2.25
RAB40BQ12829 AC005592.1-201ENST00000566527 1640 ntBASIC1□□□□□ -2.25
RAB40BQ12829 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 MIR625-201ENST00000385047 85 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 MT-TL1-201ENST00000386347 75 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 RNA5SP482-201ENST00000391269 118 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 PDCL2P1-201ENST00000419302 352 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 AC233266.1-201ENST00000454518 96 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 AC105758.1-201ENST00000506038 399 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.99□□□□□ -2.25
RAB40BQ12829 AC080078.3-201ENST00000605407 463 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 AL022345.2-201ENST00000606307 135 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 BX284668.6-201ENST00000606899 438 ntBASIC0.99□□□□□ -2.25
RAB40BQ12829 AC242852.1-201ENST00000612151 96 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms