Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 AC091178.2-201ENST00000584401 117 ntBASIC1.08□□□□□ -2.24
GABPB1Q06547 AL359821.1-201ENST00000605519 182 ntBASIC1.08□□□□□ -2.24
GABPB1Q06547 AL357075.2-201ENST00000614906 189 ntBASIC1.08□□□□□ -2.24
GABPB1Q06547 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.08□□□□□ -2.24
GABPB1Q06547 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
GABPB1Q06547 RNU6-874P-201ENST00000362390 105 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 RNA5SP361-201ENST00000362686 118 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 Y_RNA.267-201ENST00000364679 109 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 Y_RNA.339-201ENST00000365325 102 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 RNU6-376P-201ENST00000384731 106 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.07□□□□□ -2.24
GABPB1Q06547 AL353997.1-201ENST00000432936 108 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.07□□□□□ -2.24
GABPB1Q06547 SUMO1P2-201ENST00000452524 304 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.07□□□□□ -2.24
GABPB1Q06547 OR9P1P-201ENST00000496431 281 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.07□□□□□ -2.24
GABPB1Q06547 SNORA31.4-201ENST00000516049 129 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 RNU6-307P-201ENST00000516743 106 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 AC022868.1-201ENST00000517767 391 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 AP002004.2-201ENST00000531656 154 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 AC090049.2-201ENST00000550377 109 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 AC011712.1-201ENST00000588959 234 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 AC009229.3-201ENST00000608056 282 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 PISRT1.1-201ENST00000616930 107 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 AC012676.2-201ENST00000619258 186 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 U6.115-201ENST00000636045 103 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 AL391516.1-201ENST00000554380 2449 ntBASIC1.07□□□□□ -2.24
GABPB1Q06547 Y_RNA.4-201ENST00000362333 112 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 Y_RNA.72-201ENST00000362894 103 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 Y_RNA.327-201ENST00000365201 102 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 RNA5SP482-201ENST00000391269 118 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 U8.16-201ENST00000391279 133 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.06□□□□□ -2.24
GABPB1Q06547 RNU6-1054P-201ENST00000411293 104 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 CALM2P4-201ENST00000430810 426 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 AL137792.2-201ENST00000443484 235 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 RNU6-625P-201ENST00000459412 107 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
GABPB1Q06547 AC105758.1-201ENST00000506038 399 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 UBL5P1-201ENST00000507979 193 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 RNU6-322P-201ENST00000516010 103 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 MIR3674-201ENST00000636576 68 ntBASIC1.06□□□□□ -2.24
GABPB1Q06547 SNORA2.2-201ENST00000365473 135 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 Y_RNA.358-201ENST00000365491 99 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 MIR222-201ENST00000384992 110 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 MIR873-201ENST00000401120 77 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 AL451046.2-201ENST00000403074 277 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 AC092423.1-201ENST00000430165 186 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 MTND3P10-201ENST00000450967 341 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 U8.22-201ENST00000459141 133 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 RPL7P42-201ENST00000481005 679 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 AC005840.1-201ENST00000498412 377 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 AC116353.2-201ENST00000505332 712 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.05□□□□□ -2.24
GABPB1Q06547 MIR4781-201ENST00000585250 76 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.05□□□□□ -2.24
GABPB1Q06547 AL353770.2-201ENST00000620024 78 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 AC092794.2-201ENST00000620933 563 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 AC127459.3-201ENST00000624328 466 ntBASIC1.05□□□□□ -2.24
GABPB1Q06547 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.04□□□□□ -2.24
GABPB1Q06547 SNORD114-7-201ENST00000362520 77 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 SNORA1B-201ENST00000362535 133 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 RNY1P10-201ENST00000363268 113 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 RNU6-1310P-201ENST00000384153 107 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 MIR520G-201ENST00000385064 90 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 RNU6-321P-201ENST00000410912 106 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.04□□□□□ -2.24
GABPB1Q06547 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.04□□□□□ -2.24
GABPB1Q06547 RPL17P19-201ENST00000489069 552 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 SNORA31.2-201ENST00000516019 134 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 RNU7-12P-201ENST00000516030 62 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 RNU6-358P-201ENST00000516564 75 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 MIR2355-201ENST00000517199 87 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 AL358944.1-201ENST00000528537 144 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.04□□□□□ -2.24
GABPB1Q06547 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.04□□□□□ -2.24
GABPB1Q06547 AC060780.3-201ENST00000589464 80 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 AL357312.1-201ENST00000603879 298 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 AC005828.6-201ENST00000606610 232 ntBASIC1.04□□□□□ -2.24
GABPB1Q06547 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
GABPB1Q06547 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.03□□□□□ -2.24
GABPB1Q06547 RNU6-318P-201ENST00000384283 103 ntBASIC1.03□□□□□ -2.24
GABPB1Q06547 SNORD41-201ENST00000386967 70 ntBASIC1.03□□□□□ -2.24
GABPB1Q06547 FCF1P9-201ENST00000412546 282 ntBASIC1.03□□□□□ -2.24
GABPB1Q06547 RPL23AP50-201ENST00000434149 455 ntBASIC1.03□□□□□ -2.24
GABPB1Q06547 HSPE1P13-201ENST00000451143 297 ntBASIC1.03□□□□□ -2.24
GABPB1Q06547 AC022493.2-201ENST00000506122 481 ntBASIC1.03□□□□□ -2.24
GABPB1Q06547 SNORA40.9-201ENST00000515895 93 ntBASIC1.03□□□□□ -2.24
GABPB1Q06547 AC091895.1-201ENST00000624494 256 ntBASIC1.03□□□□□ -2.24
GABPB1Q06547 AC005592.1-201ENST00000566527 1640 ntBASIC1.03□□□□□ -2.24
GABPB1Q06547 RNU4-79P-201ENST00000362764 141 ntBASIC1.02□□□□□ -2.25
GABPB1Q06547 Y_RNA.88-201ENST00000363029 99 ntBASIC1.02□□□□□ -2.25
GABPB1Q06547 RNU6-454P-201ENST00000364292 107 ntBASIC1.02□□□□□ -2.25
GABPB1Q06547 Y_RNA.404-201ENST00000383978 102 ntBASIC1.02□□□□□ -2.25
GABPB1Q06547 RNU6-910P-201ENST00000390844 107 ntBASIC1.02□□□□□ -2.25
GABPB1Q06547 RNU5A-5P-201ENST00000411054 116 ntBASIC1.02□□□□□ -2.25
GABPB1Q06547 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.02□□□□□ -2.25
GABPB1Q06547 AL049830.1-201ENST00000468034 425 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms