Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 HSFY8P-201ENST00000437934 318 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.61□□□□□ -2.51
PRKDCP78527 HSPE1P23-201ENST00000509838 286 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 SNORA43.2-201ENST00000516652 128 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 AC134878.1-201ENST00000619901 243 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.61□□□□□ -2.51
PRKDCP78527 SNORA1B-201ENST00000362535 133 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 SNORD56.4-201ENST00000363883 71 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 MIR873-201ENST00000401120 77 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 RNA5SP454-201ENST00000517231 127 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.62□□□□□ -2.51
PRKDCP78527 AC099785.1-201ENST00000605697 437 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 uc_338.19-201ENST00000616808 99 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 RNU6-125P-201ENST00000384505 107 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 RNU6-817P-201ENST00000391083 104 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 MIR320C1-201ENST00000408566 88 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 AC026414.1-201ENST00000504046 698 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 AP002802.2-201ENST00000605877 235 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 RNA5SP93-201ENST00000362525 114 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 AL355143.1-201ENST00000407101 841 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.62□□□□□ -2.51
PRKDCP78527 RNU6-897P-201ENST00000517135 105 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 RNU6-706P-201ENST00000517229 104 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.62□□□□□ -2.51
PRKDCP78527 AC012409.4-201ENST00000612923 249 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 AC016597.2-201ENST00000613256 341 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 U6.108-201ENST00000637764 58 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 MIR335-201ENST00000362173 94 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 SNORD65.1-201ENST00000390889 71 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 SNORD65C-201ENST00000390962 71 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 MTCO1P27-201ENST00000448269 226 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 RNU7-136P-201ENST00000458819 69 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 AC090572.1-201ENST00000519251 160 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 MIR4293-201ENST00000584305 78 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 AL022154.1-201ENST00000604698 785 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 AC092574.1-201ENST00000609771 420 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.62□□□□□ -2.51
PRKDCP78527 AC073343.1-201ENST00000328239 651 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 RNU2-39P-201ENST00000410604 198 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 MTND1P26-201ENST00000440488 538 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 USP9YP25-201ENST00000457708 443 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 RNU7-102P-201ENST00000458948 62 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 MTND4P33-201ENST00000556706 766 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 MIR18B-201ENST00000454574 71 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.63□□□□□ -2.51
PRKDCP78527 CR383656.4-201ENST00000546909 122 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 AL157687.1-201ENST00000554853 619 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 AC091304.10-201ENST00000641554 121 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 RNU6-650P-201ENST00000365658 111 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 RNU6-880P-201ENST00000384526 107 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 MIR125B2-201ENST00000385128 89 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 RNU6-796P-201ENST00000391086 107 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 AL158050.1-201ENST00000416077 457 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 AC005002.2-201ENST00000438228 269 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 RNU7-182P-201ENST00000459009 62 ntBASIC-0.63□□□□□ -2.51
PRKDCP78527 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.63□□□□□ -2.51
PRKDCP78527 SNORD51.1-201ENST00000365405 77 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 RNU6-205P-201ENST00000390858 107 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 ELOCP17-201ENST00000414751 326 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.64□□□□□ -2.51
PRKDCP78527 MIR4676-201ENST00000583078 72 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 MIR4438-201ENST00000585271 93 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 AL158042.1-201ENST00000605338 460 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 AC104073.3-201ENST00000610942 955 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 RMST_7.1-201ENST00000621935 268 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 RNU6-580P-201ENST00000365159 107 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.64□□□□□ -2.51
PRKDCP78527 RNU7-99P-201ENST00000516271 62 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.64□□□□□ -2.51
PRKDCP78527 MIR3925-201ENST00000584674 77 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.64□□□□□ -2.51
PRKDCP78527 AL117339.3-201ENST00000418733 162 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 AL360271.2-201ENST00000447710 161 ntBASIC-0.64□□□□□ -2.51
PRKDCP78527 RNU6-289P-201ENST00000364093 107 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 MIR452-201ENST00000385020 85 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.65□□□□□ -2.51
PRKDCP78527 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.65□□□□□ -2.51
PRKDCP78527 AL139286.2-201ENST00000606838 396 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 AL139022.2-201ENST00000606934 443 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 AC074085.1-201ENST00000413598 418 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.65□□□□□ -2.51
PRKDCP78527 MTND1P14-201ENST00000427400 950 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 AC113347.3-201ENST00000509113 148 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 RNU7-172P-201ENST00000517125 64 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 AC134698.4-201ENST00000523451 826 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 ZNF299P-201ENST00000406845 1804 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.65□□□□□ -2.51
PRKDCP78527 AC133104.1-201ENST00000429100 218 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms