Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC011195.1-201ENST00000578177 177 ntBASIC0.34□□□□□ -2.36
RAB38P57729 MIR3684-201ENST00000579779 74 ntBASIC0.34□□□□□ -2.36
RAB38P57729 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.34□□□□□ -2.36
RAB38P57729 AC120024.3-201ENST00000603167 156 ntBASIC0.34□□□□□ -2.36
RAB38P57729 AL136317.1-201ENST00000612653 226 ntBASIC0.34□□□□□ -2.36
RAB38P57729 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.34□□□□□ -2.36
RAB38P57729 SNORA27.1-201ENST00000362604 124 ntBASIC0.33□□□□□ -2.36
RAB38P57729 RNY1-201ENST00000364228 113 ntBASIC0.33□□□□□ -2.36
RAB38P57729 Y_RNA.409-201ENST00000383990 98 ntBASIC0.33□□□□□ -2.36
RAB38P57729 RNU6-95P-201ENST00000384697 107 ntBASIC0.33□□□□□ -2.36
RAB38P57729 RNU6-1067P-201ENST00000384752 107 ntBASIC0.33□□□□□ -2.36
RAB38P57729 MIR517A-201ENST00000385001 87 ntBASIC0.33□□□□□ -2.36
RAB38P57729 RNU6-648P-201ENST00000410190 107 ntBASIC0.33□□□□□ -2.36
RAB38P57729 AC244098.3-201ENST00000424803 96 ntBASIC0.33□□□□□ -2.36
RAB38P57729 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.33□□□□□ -2.36
RAB38P57729 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.33□□□□□ -2.36
RAB38P57729 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.33□□□□□ -2.36
RAB38P57729 MTND1P11-201ENST00000456661 876 ntBASIC0.33□□□□□ -2.36
RAB38P57729 RNU6-956P-201ENST00000458868 103 ntBASIC0.33□□□□□ -2.36
RAB38P57729 RNU6-835P-201ENST00000516974 104 ntBASIC0.33□□□□□ -2.36
RAB38P57729 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.33□□□□□ -2.36
RAB38P57729 AL358944.1-201ENST00000528537 144 ntBASIC0.33□□□□□ -2.36
RAB38P57729 RNU6-89P-201ENST00000606519 100 ntBASIC0.33□□□□□ -2.36
RAB38P57729 RNU6-94P-201ENST00000607728 107 ntBASIC0.33□□□□□ -2.36
RAB38P57729 AC027279.3-201ENST00000625055 122 ntBASIC0.33□□□□□ -2.36
RAB38P57729 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
RAB38P57729 RNU6-1297P-201ENST00000384415 104 ntBASIC0.32□□□□□ -2.36
RAB38P57729 MIR598-201ENST00000384868 97 ntBASIC0.32□□□□□ -2.36
RAB38P57729 MIR452-201ENST00000385020 85 ntBASIC0.32□□□□□ -2.36
RAB38P57729 MIR520G-201ENST00000385064 90 ntBASIC0.32□□□□□ -2.36
RAB38P57729 RNA5SP222-201ENST00000411039 105 ntBASIC0.32□□□□□ -2.36
RAB38P57729 PIGPP3-201ENST00000425307 415 ntBASIC0.32□□□□□ -2.36
RAB38P57729 AL137792.2-201ENST00000443484 235 ntBASIC0.32□□□□□ -2.36
RAB38P57729 RPS20P10-201ENST00000451209 253 ntBASIC0.32□□□□□ -2.36
RAB38P57729 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.32□□□□□ -2.36
RAB38P57729 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
RAB38P57729 SNORA36.2-201ENST00000384004 127 ntBASIC0.31□□□□□ -2.36
RAB38P57729 Y_RNA.481-201ENST00000384373 102 ntBASIC0.31□□□□□ -2.36
RAB38P57729 MIR520C-201ENST00000385005 87 ntBASIC0.31□□□□□ -2.36
RAB38P57729 RNU6-994P-201ENST00000410507 111 ntBASIC0.31□□□□□ -2.36
RAB38P57729 AL590632.1-201ENST00000424289 371 ntBASIC0.31□□□□□ -2.36
RAB38P57729 ERLEC1P1-201ENST00000433806 578 ntBASIC0.31□□□□□ -2.36
RAB38P57729 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.31□□□□□ -2.36
RAB38P57729 AC046134.1-201ENST00000514454 666 ntBASIC0.31□□□□□ -2.36
RAB38P57729 RNU7-175P-201ENST00000515915 61 ntBASIC0.31□□□□□ -2.36
RAB38P57729 RN7SKP12-201ENST00000516275 143 ntBASIC0.31□□□□□ -2.36
RAB38P57729 AC023442.1-201ENST00000531247 422 ntBASIC0.31□□□□□ -2.36
RAB38P57729 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.31□□□□□ -2.36
RAB38P57729 AC127459.3-201ENST00000624328 466 ntBASIC0.31□□□□□ -2.36
RAB38P57729 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.31□□□□□ -2.36
RAB38P57729 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
RAB38P57729 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.3□□□□□ -2.36
RAB38P57729 Y_RNA.372-201ENST00000365599 102 ntBASIC0.3□□□□□ -2.36
RAB38P57729 RNU6-1264P-201ENST00000383891 107 ntBASIC0.3□□□□□ -2.36
RAB38P57729 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.3□□□□□ -2.36
RAB38P57729 AC114811.1-201ENST00000507207 168 ntBASIC0.3□□□□□ -2.36
RAB38P57729 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.3□□□□□ -2.36
RAB38P57729 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.3□□□□□ -2.36
RAB38P57729 RNU7-41P-201ENST00000515917 61 ntBASIC0.3□□□□□ -2.36
RAB38P57729 RNU6-1096P-201ENST00000517089 102 ntBASIC0.3□□□□□ -2.36
RAB38P57729 AC036111.3-201ENST00000526389 112 ntBASIC0.3□□□□□ -2.36
RAB38P57729 ZNF519P2-201ENST00000557032 169 ntBASIC0.3□□□□□ -2.36
RAB38P57729 MIR5696-201ENST00000578474 85 ntBASIC0.3□□□□□ -2.36
RAB38P57729 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.3□□□□□ -2.36
RAB38P57729 MTND5P16-201ENST00000460269 1703 ntBASIC0.3□□□□□ -2.36
RAB38P57729 AC073544.1-201ENST00000600110 1595 ntBASIC0.29□□□□□ -2.36
RAB38P57729 RNU6-1252P-201ENST00000363054 104 ntBASIC0.29□□□□□ -2.36
RAB38P57729 RNU6-281P-201ENST00000384212 103 ntBASIC0.29□□□□□ -2.36
RAB38P57729 Y_RNA.582-201ENST00000391023 95 ntBASIC0.29□□□□□ -2.36
RAB38P57729 SNORD111-201ENST00000408139 94 ntBASIC0.29□□□□□ -2.36
RAB38P57729 MIR1298-201ENST00000408783 112 ntBASIC0.29□□□□□ -2.36
RAB38P57729 AC243428.1-201ENST00000421099 264 ntBASIC0.29□□□□□ -2.36
RAB38P57729 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.29□□□□□ -2.36
RAB38P57729 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.29□□□□□ -2.36
RAB38P57729 AC092447.3-201ENST00000426027 686 ntBASIC0.29□□□□□ -2.36
RAB38P57729 MTCO2P12-201ENST00000427426 682 ntBASIC0.29□□□□□ -2.36
RAB38P57729 RN7SKP164-201ENST00000516138 266 ntBASIC0.29□□□□□ -2.36
RAB38P57729 SNORA74.3-201ENST00000517108 154 ntBASIC0.29□□□□□ -2.36
RAB38P57729 AC145350.1-201ENST00000567426 208 ntBASIC0.29□□□□□ -2.36
RAB38P57729 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.29□□□□□ -2.36
RAB38P57729 AC019193.3-201ENST00000609144 554 ntBASIC0.29□□□□□ -2.36
RAB38P57729 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
RAB38P57729 SNORD68-201ENST00000363214 84 ntBASIC0.28□□□□□ -2.36
RAB38P57729 RNU6-117P-201ENST00000365415 107 ntBASIC0.28□□□□□ -2.36
RAB38P57729 Y_RNA.373-201ENST00000365600 103 ntBASIC0.28□□□□□ -2.36
RAB38P57729 MTATP6P13-201ENST00000438531 667 ntBASIC0.28□□□□□ -2.36
RAB38P57729 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.28□□□□□ -2.36
RAB38P57729 RNU6-1114P-201ENST00000516022 107 ntBASIC0.28□□□□□ -2.36
RAB38P57729 AF235103.2-201ENST00000525753 346 ntBASIC0.28□□□□□ -2.36
RAB38P57729 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.28□□□□□ -2.36
RAB38P57729 LRRC34P1-201ENST00000542742 915 ntBASIC0.28□□□□□ -2.36
RAB38P57729 AC093023.1-201ENST00000547375 507 ntBASIC0.28□□□□□ -2.36
RAB38P57729 AC124303.1-201ENST00000605703 360 ntBASIC0.28□□□□□ -2.36
RAB38P57729 AC092954.2-201ENST00000609103 430 ntBASIC0.28□□□□□ -2.36
RAB38P57729 AL138726.1-201ENST00000614873 333 ntBASIC0.28□□□□□ -2.36
RAB38P57729 PVT1_3.1-201ENST00000620853 95 ntBASIC0.28□□□□□ -2.36
RAB38P57729 MIR6516-201ENST00000630554 81 ntBASIC0.28□□□□□ -2.36
RAB38P57729 AC100810.6-201ENST00000638068 285 ntBASIC0.28□□□□□ -2.36
RAB38P57729 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
RAB38P57729 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 360 ms