Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MTCYBP4-201ENST00000401524 249 ntBASIC0.12□□□□□ -2.39
RPL28P46779 RPL30P16-201ENST00000419341 429 ntBASIC0.12□□□□□ -2.39
RPL28P46779 PIGPP3-201ENST00000425307 415 ntBASIC0.12□□□□□ -2.39
RPL28P46779 AL137792.2-201ENST00000443484 235 ntBASIC0.12□□□□□ -2.39
RPL28P46779 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.12□□□□□ -2.39
RPL28P46779 PCNPP5-201ENST00000452246 481 ntBASIC0.12□□□□□ -2.39
RPL28P46779 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.12□□□□□ -2.39
RPL28P46779 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.12□□□□□ -2.39
RPL28P46779 AC114811.1-201ENST00000507207 168 ntBASIC0.12□□□□□ -2.39
RPL28P46779 AC023442.1-201ENST00000531247 422 ntBASIC0.12□□□□□ -2.39
RPL28P46779 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.12□□□□□ -2.39
RPL28P46779 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.12□□□□□ -2.39
RPL28P46779 AL138726.1-201ENST00000614873 333 ntBASIC0.12□□□□□ -2.39
RPL28P46779 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
RPL28P46779 RNU6-407P-201ENST00000365280 104 ntBASIC0.11□□□□□ -2.39
RPL28P46779 SNORD37.1-201ENST00000390968 65 ntBASIC0.11□□□□□ -2.39
RPL28P46779 MIR1302-7-201ENST00000408841 72 ntBASIC0.11□□□□□ -2.39
RPL28P46779 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.11□□□□□ -2.39
RPL28P46779 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.11□□□□□ -2.39
RPL28P46779 RNU6-107P-201ENST00000516643 102 ntBASIC0.11□□□□□ -2.39
RPL28P46779 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.11□□□□□ -2.39
RPL28P46779 MIR4528-201ENST00000577763 90 ntBASIC0.11□□□□□ -2.39
RPL28P46779 MIR4764-201ENST00000580680 88 ntBASIC0.11□□□□□ -2.39
RPL28P46779 AL050303.3-201ENST00000613704 284 ntBASIC0.11□□□□□ -2.39
RPL28P46779 U8.5-201ENST00000364528 136 ntBASIC0.1□□□□□ -2.39
RPL28P46779 SNORD14.1-201ENST00000365609 90 ntBASIC0.1□□□□□ -2.39
RPL28P46779 AC117470.1-201ENST00000381974 330 ntBASIC0.1□□□□□ -2.39
RPL28P46779 RNU6-790P-201ENST00000384479 105 ntBASIC0.1□□□□□ -2.39
RPL28P46779 MIR573-201ENST00000384964 99 ntBASIC0.1□□□□□ -2.39
RPL28P46779 MIR514A2-201ENST00000385131 88 ntBASIC0.1□□□□□ -2.39
RPL28P46779 MIR514A3-201ENST00000385132 88 ntBASIC0.1□□□□□ -2.39
RPL28P46779 RNA5SP193-201ENST00000410353 107 ntBASIC0.1□□□□□ -2.39
RPL28P46779 RNU6-1304P-201ENST00000411374 106 ntBASIC0.1□□□□□ -2.39
RPL28P46779 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.1□□□□□ -2.39
RPL28P46779 AL445567.1-201ENST00000439121 144 ntBASIC0.1□□□□□ -2.39
RPL28P46779 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.1□□□□□ -2.39
RPL28P46779 Y_RNA.683-201ENST00000516508 93 ntBASIC0.1□□□□□ -2.39
RPL28P46779 RNU7-43P-201ENST00000516554 64 ntBASIC0.1□□□□□ -2.39
RPL28P46779 RNU6-1096P-201ENST00000517089 102 ntBASIC0.1□□□□□ -2.39
RPL28P46779 AC134698.4-201ENST00000523451 826 ntBASIC0.1□□□□□ -2.39
RPL28P46779 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.1□□□□□ -2.39
RPL28P46779 MIR4300-201ENST00000581016 96 ntBASIC0.1□□□□□ -2.39
RPL28P46779 MIR4762-201ENST00000585261 75 ntBASIC0.1□□□□□ -2.39
RPL28P46779 AC104695.3-201ENST00000604052 296 ntBASIC0.1□□□□□ -2.39
RPL28P46779 AC127459.3-201ENST00000624328 466 ntBASIC0.1□□□□□ -2.39
RPL28P46779 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.1□□□□□ -2.39
RPL28P46779 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
RPL28P46779 MIR1-1-201ENST00000362147 71 ntBASIC0.09□□□□□ -2.4
RPL28P46779 RNU6-349P-201ENST00000362402 107 ntBASIC0.09□□□□□ -2.4
RPL28P46779 Y_RNA.151-201ENST00000363566 112 ntBASIC0.09□□□□□ -2.4
RPL28P46779 Y_RNA.169-201ENST00000363745 96 ntBASIC0.09□□□□□ -2.4
RPL28P46779 RNU6-654P-201ENST00000364373 107 ntBASIC0.09□□□□□ -2.4
RPL28P46779 RNU6-1264P-201ENST00000383891 107 ntBASIC0.09□□□□□ -2.4
RPL28P46779 RNU6-128P-201ENST00000383976 107 ntBASIC0.09□□□□□ -2.4
RPL28P46779 RNU6-1105P-201ENST00000384774 107 ntBASIC0.09□□□□□ -2.4
RPL28P46779 AC243428.1-201ENST00000421099 264 ntBASIC0.09□□□□□ -2.4
RPL28P46779 AC046134.1-201ENST00000514454 666 ntBASIC0.09□□□□□ -2.4
RPL28P46779 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.09□□□□□ -2.4
RPL28P46779 MIR4431-201ENST00000579990 94 ntBASIC0.09□□□□□ -2.4
RPL28P46779 AC100812.1-201ENST00000607622 580 ntBASIC0.09□□□□□ -2.4
RPL28P46779 AL603755.1-201ENST00000619504 163 ntBASIC0.09□□□□□ -2.4
RPL28P46779 AC008133.2-201ENST00000624540 351 ntBASIC0.09□□□□□ -2.4
RPL28P46779 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.09□□□□□ -2.4
RPL28P46779 AC010487.4-201ENST00000637027 61 ntBASIC0.09□□□□□ -2.4
RPL28P46779 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.08□□□□□ -2.4
RPL28P46779 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.08□□□□□ -2.4
RPL28P46779 Y_RNA.1-201ENST00000352915 104 ntBASIC0.08□□□□□ -2.4
RPL28P46779 MIR103A1-201ENST00000362165 78 ntBASIC0.08□□□□□ -2.4
RPL28P46779 RNY1-201ENST00000364228 113 ntBASIC0.08□□□□□ -2.4
RPL28P46779 MIR15B-201ENST00000385045 98 ntBASIC0.08□□□□□ -2.4
RPL28P46779 MIR516B2-201ENST00000385190 85 ntBASIC0.08□□□□□ -2.4
RPL28P46779 MIR136-201ENST00000385207 82 ntBASIC0.08□□□□□ -2.4
RPL28P46779 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.08□□□□□ -2.4
RPL28P46779 RNA5SP511-201ENST00000410487 115 ntBASIC0.08□□□□□ -2.4
RPL28P46779 MTND1P4-201ENST00000435196 415 ntBASIC0.08□□□□□ -2.4
RPL28P46779 MTND3P16-201ENST00000452205 344 ntBASIC0.08□□□□□ -2.4
RPL28P46779 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.08□□□□□ -2.4
RPL28P46779 PCMTD1P1-201ENST00000455560 355 ntBASIC0.08□□□□□ -2.4
RPL28P46779 MTCO3P10-201ENST00000455912 772 ntBASIC0.08□□□□□ -2.4
RPL28P46779 RPS3AP17-201ENST00000472594 777 ntBASIC0.08□□□□□ -2.4
RPL28P46779 AC074133.1-201ENST00000515696 183 ntBASIC0.08□□□□□ -2.4
RPL28P46779 SNORA62.5-201ENST00000516634 120 ntBASIC0.08□□□□□ -2.4
RPL28P46779 MIR5696-201ENST00000578474 85 ntBASIC0.08□□□□□ -2.4
RPL28P46779 POLR3GP2-201ENST00000588366 668 ntBASIC0.08□□□□□ -2.4
RPL28P46779 AP001330.5-201ENST00000607176 411 ntBASIC0.08□□□□□ -2.4
RPL28P46779 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.08□□□□□ -2.4
RPL28P46779 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
RPL28P46779 MIR18A-201ENST00000362310 71 ntBASIC0.07□□□□□ -2.4
RPL28P46779 RNU6-369P-201ENST00000362515 102 ntBASIC0.07□□□□□ -2.4
RPL28P46779 SNORD68-201ENST00000363214 84 ntBASIC0.07□□□□□ -2.4
RPL28P46779 RNU6-522P-201ENST00000364497 107 ntBASIC0.07□□□□□ -2.4
RPL28P46779 RNU4-45P-201ENST00000365469 141 ntBASIC0.07□□□□□ -2.4
RPL28P46779 RNU6-281P-201ENST00000384212 103 ntBASIC0.07□□□□□ -2.4
RPL28P46779 SNORA2B-201ENST00000384583 137 ntBASIC0.07□□□□□ -2.4
RPL28P46779 RNA5SP299-201ENST00000391203 116 ntBASIC0.07□□□□□ -2.4
RPL28P46779 MIR873-201ENST00000401120 77 ntBASIC0.07□□□□□ -2.4
RPL28P46779 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
RPL28P46779 RNU6-613P-201ENST00000410412 108 ntBASIC0.07□□□□□ -2.4
RPL28P46779 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.07□□□□□ -2.4
RPL28P46779 RNU6-261P-201ENST00000459506 102 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms