Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 EIF1P2-201ENST00000428233 350 ntBASIC0.79□□□□□ -2.28
SSR1P43307 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.79□□□□□ -2.28
SSR1P43307 RPEP5-201ENST00000441137 268 ntBASIC0.79□□□□□ -2.28
SSR1P43307 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.79□□□□□ -2.28
SSR1P43307 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.79□□□□□ -2.28
SSR1P43307 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.79□□□□□ -2.28
SSR1P43307 RNU6-566P-201ENST00000516790 107 ntBASIC0.79□□□□□ -2.28
SSR1P43307 RNA5SP102-201ENST00000516865 106 ntBASIC0.79□□□□□ -2.28
SSR1P43307 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.79□□□□□ -2.28
SSR1P43307 BNIP3P10-201ENST00000605360 577 ntBASIC0.79□□□□□ -2.28
SSR1P43307 AC005014.2-201ENST00000607795 599 ntBASIC0.79□□□□□ -2.28
SSR1P43307 RNU6-879P-201ENST00000364328 108 ntBASIC0.78□□□□□ -2.28
SSR1P43307 SNORD114-24-201ENST00000365029 72 ntBASIC0.78□□□□□ -2.28
SSR1P43307 USMG5P1-201ENST00000425964 177 ntBASIC0.78□□□□□ -2.28
SSR1P43307 AL589823.1-201ENST00000429577 183 ntBASIC0.78□□□□□ -2.28
SSR1P43307 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.78□□□□□ -2.28
SSR1P43307 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.78□□□□□ -2.28
SSR1P43307 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.78□□□□□ -2.28
SSR1P43307 Y_RNA.682-201ENST00000516457 100 ntBASIC0.78□□□□□ -2.28
SSR1P43307 RNU6-341P-201ENST00000516973 96 ntBASIC0.78□□□□□ -2.28
SSR1P43307 RNU1-54P-201ENST00000517181 120 ntBASIC0.78□□□□□ -2.28
SSR1P43307 AC109635.3-201ENST00000529536 185 ntBASIC0.78□□□□□ -2.28
SSR1P43307 AC023442.1-201ENST00000531247 422 ntBASIC0.78□□□□□ -2.28
SSR1P43307 MIR4790-201ENST00000577799 79 ntBASIC0.78□□□□□ -2.28
SSR1P43307 MIR4781-201ENST00000585250 76 ntBASIC0.78□□□□□ -2.28
SSR1P43307 AC100812.1-201ENST00000607622 580 ntBASIC0.78□□□□□ -2.28
SSR1P43307 U6.115-201ENST00000636045 103 ntBASIC0.78□□□□□ -2.28
SSR1P43307 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SSR1P43307 SNORA25.3-201ENST00000363205 127 ntBASIC0.77□□□□□ -2.29
SSR1P43307 RNY1P10-201ENST00000363268 113 ntBASIC0.77□□□□□ -2.29
SSR1P43307 Y_RNA.330-201ENST00000365230 109 ntBASIC0.77□□□□□ -2.29
SSR1P43307 RNU4-12P-201ENST00000365233 139 ntBASIC0.77□□□□□ -2.29
SSR1P43307 SNORA80D-201ENST00000384488 135 ntBASIC0.77□□□□□ -2.29
SSR1P43307 Y_RNA.557-201ENST00000384680 107 ntBASIC0.77□□□□□ -2.29
SSR1P43307 AL137792.2-201ENST00000443484 235 ntBASIC0.77□□□□□ -2.29
SSR1P43307 AC098826.2-201ENST00000452011 651 ntBASIC0.77□□□□□ -2.29
SSR1P43307 RNU7-21P-201ENST00000459430 62 ntBASIC0.77□□□□□ -2.29
SSR1P43307 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.77□□□□□ -2.29
SSR1P43307 RNU4-49P-201ENST00000516080 140 ntBASIC0.77□□□□□ -2.29
SSR1P43307 SNORD111.1-201ENST00000516421 86 ntBASIC0.77□□□□□ -2.29
SSR1P43307 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.77□□□□□ -2.29
SSR1P43307 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.77□□□□□ -2.29
SSR1P43307 AC023827.1-201ENST00000569247 97 ntBASIC0.77□□□□□ -2.29
SSR1P43307 AC068790.6-201ENST00000602558 258 ntBASIC0.77□□□□□ -2.29
SSR1P43307 AC012557.2-201ENST00000605919 418 ntBASIC0.77□□□□□ -2.29
SSR1P43307 AC006435.5-201ENST00000624486 112 ntBASIC0.77□□□□□ -2.29
SSR1P43307 MIR3662-201ENST00000637030 95 ntBASIC0.77□□□□□ -2.29
SSR1P43307 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.77□□□□□ -2.29
SSR1P43307 MIR337-201ENST00000362281 93 ntBASIC0.76□□□□□ -2.29
SSR1P43307 MIR96-201ENST00000362288 78 ntBASIC0.76□□□□□ -2.29
SSR1P43307 Y_RNA.89-201ENST00000363031 102 ntBASIC0.76□□□□□ -2.29
SSR1P43307 RNY1P16-201ENST00000363063 111 ntBASIC0.76□□□□□ -2.29
SSR1P43307 Y_RNA.301-201ENST00000364990 103 ntBASIC0.76□□□□□ -2.29
SSR1P43307 RNU6-1264P-201ENST00000383891 107 ntBASIC0.76□□□□□ -2.29
SSR1P43307 Y_RNA.402-201ENST00000383972 102 ntBASIC0.76□□□□□ -2.29
SSR1P43307 MIR190B-201ENST00000401119 79 ntBASIC0.76□□□□□ -2.29
SSR1P43307 RNU6-733P-201ENST00000410759 104 ntBASIC0.76□□□□□ -2.29
SSR1P43307 RPS26P5-201ENST00000418544 335 ntBASIC0.76□□□□□ -2.29
SSR1P43307 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.76□□□□□ -2.29
SSR1P43307 MTND1P17-201ENST00000448961 204 ntBASIC0.76□□□□□ -2.29
SSR1P43307 RPL39P39-201ENST00000455840 151 ntBASIC0.76□□□□□ -2.29
SSR1P43307 AL049830.1-201ENST00000468034 425 ntBASIC0.76□□□□□ -2.29
SSR1P43307 AC117454.1-201ENST00000491120 168 ntBASIC0.76□□□□□ -2.29
SSR1P43307 RNU6-1096P-201ENST00000517089 102 ntBASIC0.76□□□□□ -2.29
SSR1P43307 AC022868.1-201ENST00000517767 391 ntBASIC0.76□□□□□ -2.29
SSR1P43307 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.76□□□□□ -2.29
SSR1P43307 AC018448.1-201ENST00000552843 316 ntBASIC0.76□□□□□ -2.29
SSR1P43307 AC004817.2-201ENST00000561794 651 ntBASIC0.76□□□□□ -2.29
SSR1P43307 MIR6767-201ENST00000637302 66 ntBASIC0.76□□□□□ -2.29
SSR1P43307 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SSR1P43307 Y_RNA.2-201ENST00000362330 96 ntBASIC0.75□□□□□ -2.29
SSR1P43307 SNORD68-201ENST00000363214 84 ntBASIC0.75□□□□□ -2.29
SSR1P43307 RNU6-117P-201ENST00000365415 107 ntBASIC0.75□□□□□ -2.29
SSR1P43307 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SSR1P43307 Y_RNA.436-201ENST00000384097 102 ntBASIC0.75□□□□□ -2.29
SSR1P43307 RNU6-1145P-201ENST00000384246 107 ntBASIC0.75□□□□□ -2.29
SSR1P43307 MTND5P15-201ENST00000434246 349 ntBASIC0.75□□□□□ -2.29
SSR1P43307 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.75□□□□□ -2.29
SSR1P43307 LINC01399-202ENST00000458450 244 ntBASIC0.75□□□□□ -2.29
SSR1P43307 AP002004.2-201ENST00000531656 154 ntBASIC0.75□□□□□ -2.29
SSR1P43307 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.75□□□□□ -2.29
SSR1P43307 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.75□□□□□ -2.29
SSR1P43307 MIR3124-201ENST00000582636 67 ntBASIC0.75□□□□□ -2.29
SSR1P43307 PRELID3BP2-201ENST00000605362 201 ntBASIC0.75□□□□□ -2.29
SSR1P43307 AC108706.1-201ENST00000611053 297 ntBASIC0.75□□□□□ -2.29
SSR1P43307 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
SSR1P43307 AC127459.3-201ENST00000624328 466 ntBASIC0.75□□□□□ -2.29
SSR1P43307 AC068137.4-201ENST00000638485 296 ntBASIC0.75□□□□□ -2.29
SSR1P43307 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SSR1P43307 MIR373-201ENST00000362273 69 ntBASIC0.74□□□□□ -2.29
SSR1P43307 Y_RNA.295-201ENST00000364918 102 ntBASIC0.74□□□□□ -2.29
SSR1P43307 RNU6-596P-201ENST00000365395 98 ntBASIC0.74□□□□□ -2.29
SSR1P43307 Y_RNA.358-201ENST00000365491 99 ntBASIC0.74□□□□□ -2.29
SSR1P43307 RNU6-318P-201ENST00000384283 103 ntBASIC0.74□□□□□ -2.29
SSR1P43307 SNORD116-13-201ENST00000384408 92 ntBASIC0.74□□□□□ -2.29
SSR1P43307 Y_RNA.498-201ENST00000384460 102 ntBASIC0.74□□□□□ -2.29
SSR1P43307 MIR516B2-201ENST00000385190 85 ntBASIC0.74□□□□□ -2.29
SSR1P43307 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SSR1P43307 RNU5A-5P-201ENST00000411054 116 ntBASIC0.74□□□□□ -2.29
SSR1P43307 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms