Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.53□□□□□ -2.49
SDC4P31431 MIR4703-201ENST00000577728 79 ntBASIC-0.53□□□□□ -2.49
SDC4P31431 AF250324.2-201ENST00000608299 610 ntBASIC-0.53□□□□□ -2.49
SDC4P31431 AL133173.2-201ENST00000614270 90 ntBASIC-0.53□□□□□ -2.49
SDC4P31431 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.53□□□□□ -2.49
SDC4P31431 AC027807.2-201ENST00000616099 408 ntBASIC-0.53□□□□□ -2.49
SDC4P31431 AC009878.1-201ENST00000621819 340 ntBASIC-0.53□□□□□ -2.49
SDC4P31431 MIR377-201ENST00000362145 69 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 RNU6-873P-201ENST00000363833 107 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 RNA5SP117-201ENST00000365294 118 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 RNU6-157P-201ENST00000383957 107 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 MIR329-2-201ENST00000385029 84 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 MTCO2P33-201ENST00000402100 465 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 RPL39P34-201ENST00000477141 156 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.54□□□□□ -2.5
SDC4P31431 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.54□□□□□ -2.5
SDC4P31431 AC105417.1-201ENST00000514691 285 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.54□□□□□ -2.5
SDC4P31431 RNU6-782P-201ENST00000516852 104 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 AC069113.1-201ENST00000517763 267 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.54□□□□□ -2.5
SDC4P31431 MIR4752-201ENST00000579672 72 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.54□□□□□ -2.5
SDC4P31431 AC010525.2-201ENST00000590920 195 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 AC013437.2-201ENST00000639587 677 ntBASIC-0.54□□□□□ -2.5
SDC4P31431 SNORA1.1-201ENST00000364671 133 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 RNU6-117P-201ENST00000365415 107 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 RNU6-245P-201ENST00000384020 107 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 RNA5SP163-201ENST00000410304 99 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.55□□□□□ -2.5
SDC4P31431 MTCO2P11-201ENST00000431069 680 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.55□□□□□ -2.5
SDC4P31431 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.55□□□□□ -2.5
SDC4P31431 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.55□□□□□ -2.5
SDC4P31431 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.55□□□□□ -2.5
SDC4P31431 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.55□□□□□ -2.5
SDC4P31431 SCARNA8-201ENST00000515924 131 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 SNORD27.1-201ENST00000516319 72 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 AL358944.1-201ENST00000528537 144 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 AC090617.3-201ENST00000573670 475 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 AL049777.1-201ENST00000622740 518 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 SEPT14P19-203ENST00000633205 211 ntBASIC-0.55□□□□□ -2.5
SDC4P31431 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 U8.5-201ENST00000364528 136 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 MT-TN-201ENST00000387400 73 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.56□□□□□ -2.5
SDC4P31431 AL365184.2-201ENST00000431139 435 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 Z82188.1-201ENST00000436709 154 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 AL137792.2-201ENST00000443484 235 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 RNU7-167P-201ENST00000459160 62 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 TRBVB-201ENST00000477100 408 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 RNU6-848P-201ENST00000515948 107 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 RNU6-617P-201ENST00000516147 107 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 RNU6-473P-201ENST00000516164 107 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 RN7SKP287-201ENST00000516546 266 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 AC104576.1-201ENST00000524225 88 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 AC026371.1-201ENST00000551867 419 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 MTND4P33-201ENST00000556706 766 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 AL158211.1-201ENST00000566763 763 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 AC100830.2-201ENST00000581636 240 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 AC011921.3-201ENST00000605540 361 ntBASIC-0.56□□□□□ -2.5
SDC4P31431 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.57□□□□□ -2.5
SDC4P31431 SNORA27.1-201ENST00000362604 124 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 SNORA18.1-201ENST00000363418 128 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 RNU4-68P-201ENST00000364314 141 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 RNU6-364P-201ENST00000384387 107 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 MIR625-201ENST00000385047 85 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 RNU6-269P-201ENST00000391077 97 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 MTCO2P27-201ENST00000420740 428 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 AC090844.1-201ENST00000422019 156 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 SUMO1P3-201ENST00000439961 304 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.57□□□□□ -2.5
SDC4P31431 SNORA14.1-201ENST00000516113 141 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 RNU6-504P-201ENST00000516568 104 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 RNA5SP54-201ENST00000516951 92 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 RNU6-410P-201ENST00000517006 107 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.57□□□□□ -2.5
SDC4P31431 MIR3941-201ENST00000582572 103 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 MIR4762-201ENST00000585261 75 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 AL158209.2-201ENST00000619266 216 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 SNORD38B-202ENST00000625943 69 ntBASIC-0.57□□□□□ -2.5
SDC4P31431 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.57□□□□□ -2.5
SDC4P31431 RNU4-21P-201ENST00000362802 126 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-161P-201ENST00000363051 106 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU4-92P-201ENST00000363783 136 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNA5SP275-201ENST00000363936 118 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.58□□□□□ -2.5
SDC4P31431 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.58□□□□□ -2.5
SDC4P31431 RNU6-447P-201ENST00000410293 104 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms