Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC068205.3-201ENST00000636385 468 ntBASIC1.96□□□□□ -2.1
HOXC8P31273 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HOXC8P31273 RNU6-626P-201ENST00000363354 107 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 Y_RNA.338-201ENST00000365320 114 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 RNU6-20P-201ENST00000384106 107 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 SNORA67.5-201ENST00000391036 107 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.95□□□□□ -2.1
HOXC8P31273 RPL21P38-201ENST00000418090 167 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXC8P31273 AC005002.2-201ENST00000438228 269 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 AL731563.1-201ENST00000442202 214 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 AC098869.1-201ENST00000481627 292 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXC8P31273 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXC8P31273 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXC8P31273 MIR4300-201ENST00000581016 96 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 MIR4503-201ENST00000582187 83 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 AC005786.1-201ENST00000588553 154 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 snoU13.31-201ENST00000607291 104 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 MIR8081-201ENST00000611533 95 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 7SK.10-201ENST00000621414 298 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.95□□□□□ -2.1
HOXC8P31273 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
HOXC8P31273 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HOXC8P31273 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.94□□□□□ -2.1
HOXC8P31273 Y_RNA.4-201ENST00000362333 112 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 SNORA67.2-201ENST00000384300 149 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 RNU6-463P-201ENST00000384340 107 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 MIR300-201ENST00000401138 83 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 AC139712.2-201ENST00000424302 339 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 RAB28P5-201ENST00000427490 651 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 HMGB3P17-201ENST00000504195 649 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
HOXC8P31273 AC074133.1-201ENST00000515696 183 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 CYCSP23-201ENST00000519781 313 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 AP003733.2-201ENST00000529409 171 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 AK6P2-201ENST00000549020 471 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 AC055872.1-201ENST00000570978 278 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.94□□□□□ -2.1
HOXC8P31273 MIR215-201ENST00000384858 110 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 SNORA48.1-201ENST00000390879 135 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 MIR1302-3-201ENST00000408128 138 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 MIR1283-1-201ENST00000408494 87 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 RNU4-30P-201ENST00000410245 143 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 Y_RNA.602-201ENST00000410535 92 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXC8P31273 HMGN2P9-201ENST00000476875 229 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.93□□□□□ -2.1
HOXC8P31273 RNU6-1143P-201ENST00000516125 104 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 RNU6-570P-201ENST00000517051 105 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 SUMO2P18-201ENST00000518873 252 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXC8P31273 AP002001.1-203ENST00000534002 267 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 CBX3P4-201ENST00000538909 354 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 MIR3169-201ENST00000578032 83 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 AC005176.2-201ENST00000596933 147 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 MIR8062-201ENST00000621515 85 ntBASIC1.93□□□□□ -2.1
HOXC8P31273 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HOXC8P31273 SNORD113-8-201ENST00000363497 74 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 SNORD114-6-201ENST00000364393 72 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 SNORA72.2-201ENST00000365028 127 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 Y_RNA.396-201ENST00000383949 103 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 Y_RNA.461-201ENST00000384263 103 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 MIR548B-201ENST00000385247 97 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 SNORD115-46-201ENST00000390982 71 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 RPL23AP36-201ENST00000413895 458 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 AC025465.3-201ENST00000510570 311 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.92□□□□□ -2.1
HOXC8P31273 AL161670.1-201ENST00000554348 137 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 MIR4753-201ENST00000585119 83 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 AC008873.1-201ENST00000625051 138 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.92□□□□□ -2.1
HOXC8P31273 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HOXC8P31273 RNU6-1175P-201ENST00000365200 107 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 Y_RNA.376-201ENST00000365638 108 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 RNU6-505P-201ENST00000384427 107 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 RNU6-102P-201ENST00000384485 104 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 MIR586-201ENST00000385035 97 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 MT-TW-201ENST00000387382 68 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 RNU4-62P-201ENST00000410125 130 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 BTF3P4-201ENST00000418852 495 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC8P31273 RNU7-110P-201ENST00000516891 62 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC8P31273 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC8P31273 MIR4303-201ENST00000581299 66 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 MIR4713-201ENST00000582691 75 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 MIR3149-201ENST00000584629 83 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 AC004467.1-201ENST00000615678 330 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXC8P31273 MIR3674-201ENST00000636576 68 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HOXC8P31273 AP000553.5-201ENST00000641933 54 ntBASIC1.91□□□□□ -2.1
HOXC8P31273 MIR378A-201ENST00000362177 66 ntBASIC1.9□□□□□ -2.11
HOXC8P31273 snoU2_19.2-201ENST00000363024 80 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms