Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.07□□□□□ -2.58
CLIP1P30622 AC114491.1-201ENST00000416095 246 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.07□□□□□ -2.58
CLIP1P30622 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.07□□□□□ -2.58
CLIP1P30622 RNU6-1037P-201ENST00000459571 107 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.07□□□□□ -2.58
CLIP1P30622 LRRC34P1-201ENST00000542742 915 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 AC091178.2-201ENST00000584401 117 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 AC125232.2-201ENST00000592457 143 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 AC121247.2-201ENST00000604776 136 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 SNORA70.25-201ENST00000612741 95 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 AC078880.5-201ENST00000617845 421 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 SNORD83B-201ENST00000386745 93 ntBASIC-1.08□□□□□ -2.58
CLIP1P30622 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.08□□□□□ -2.58
CLIP1P30622 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.08□□□□□ -2.58
CLIP1P30622 SPINT5P-201ENST00000448174 155 ntBASIC-1.08□□□□□ -2.58
CLIP1P30622 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.08□□□□□ -2.58
CLIP1P30622 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.08□□□□□ -2.58
CLIP1P30622 SNORA18.4-201ENST00000516440 124 ntBASIC-1.08□□□□□ -2.58
CLIP1P30622 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.08□□□□□ -2.58
CLIP1P30622 AC026470.2-201ENST00000561492 181 ntBASIC-1.08□□□□□ -2.58
CLIP1P30622 AC138749.4-201ENST00000563970 127 ntBASIC-1.08□□□□□ -2.58
CLIP1P30622 AC006600.1-201ENST00000572529 153 ntBASIC-1.08□□□□□ -2.58
CLIP1P30622 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.08□□□□□ -2.58
CLIP1P30622 AC099785.1-201ENST00000605697 437 ntBASIC-1.08□□□□□ -2.58
CLIP1P30622 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.08□□□□□ -2.58
CLIP1P30622 MIR4320-201ENST00000636981 65 ntBASIC-1.08□□□□□ -2.58
CLIP1P30622 AC112487.2-201ENST00000637950 304 ntBASIC-1.08□□□□□ -2.58
CLIP1P30622 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 MIR215-201ENST00000384858 110 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 SNORD28B-201ENST00000390993 75 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 MTCO3P40-201ENST00000392516 676 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 AL158050.1-201ENST00000416077 457 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 MTND4LP14-201ENST00000429447 288 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 AL365184.2-201ENST00000431139 435 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 RNU7-185P-201ENST00000459215 60 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-1.09□□□□□ -2.58
CLIP1P30622 FGF7P1-201ENST00000582820 288 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 AP000811.1-201ENST00000603803 651 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 AP000907.4-201ENST00000604143 237 ntBASIC-1.09□□□□□ -2.58
CLIP1P30622 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.09□□□□□ -2.58
CLIP1P30622 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.1□□□□□ -2.59
CLIP1P30622 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.1□□□□□ -2.59
CLIP1P30622 MIR570-201ENST00000384917 97 ntBASIC-1.1□□□□□ -2.59
CLIP1P30622 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.1□□□□□ -2.59
CLIP1P30622 MRPS10P1-201ENST00000448483 130 ntBASIC-1.1□□□□□ -2.59
CLIP1P30622 RNU7-73P-201ENST00000458743 63 ntBASIC-1.1□□□□□ -2.59
CLIP1P30622 RNA5SP66-201ENST00000517178 101 ntBASIC-1.1□□□□□ -2.59
CLIP1P30622 ADI1P3-201ENST00000549509 470 ntBASIC-1.1□□□□□ -2.59
CLIP1P30622 MIR5706-201ENST00000579841 80 ntBASIC-1.1□□□□□ -2.59
CLIP1P30622 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.1□□□□□ -2.59
CLIP1P30622 AC073539.2-201ENST00000597113 165 ntBASIC-1.1□□□□□ -2.59
CLIP1P30622 AL450270.1-201ENST00000606160 391 ntBASIC-1.1□□□□□ -2.59
CLIP1P30622 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.1□□□□□ -2.59
CLIP1P30622 AC010332.2-201ENST00000613083 1904 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 AC117470.1-201ENST00000381974 330 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 SNORD28-201ENST00000384706 75 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 MIR15B-201ENST00000385045 98 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.11□□□□□ -2.59
CLIP1P30622 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 BTBD7P2-201ENST00000441962 620 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 MTCO1P27-201ENST00000448269 226 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 RNU7-62P-201ENST00000458856 62 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 MIR548AR-201ENST00000582191 57 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 MIR4264-201ENST00000583520 66 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 AC008873.1-201ENST00000625051 138 ntBASIC-1.11□□□□□ -2.59
CLIP1P30622 SNORD114-3-201ENST00000364969 75 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 RPS29P13-201ENST00000402041 169 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 MCFD2P1-201ENST00000417812 300 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 ZNF114P1-201ENST00000453500 292 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 RPL23AP75-201ENST00000491601 451 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 AP003168.1-201ENST00000530091 307 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 MIR378D2-201ENST00000580636 98 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 AC087683.1-201ENST00000591187 441 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 AC012409.4-201ENST00000612923 249 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 AC105081.1-201ENST00000617727 106 ntBASIC-1.12□□□□□ -2.59
CLIP1P30622 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.12□□□□□ -2.59
CLIP1P30622 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.13□□□□□ -2.59
CLIP1P30622 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.13□□□□□ -2.59
CLIP1P30622 MIR562-201ENST00000384894 95 ntBASIC-1.13□□□□□ -2.59
CLIP1P30622 MIR1207-201ENST00000408249 87 ntBASIC-1.13□□□□□ -2.59
CLIP1P30622 MIR1257-201ENST00000408490 117 ntBASIC-1.13□□□□□ -2.59
CLIP1P30622 RNU6-607P-201ENST00000411283 108 ntBASIC-1.13□□□□□ -2.59
CLIP1P30622 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.13□□□□□ -2.59
CLIP1P30622 SEPT14P24-201ENST00000447236 180 ntBASIC-1.13□□□□□ -2.59
CLIP1P30622 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-1.13□□□□□ -2.59
CLIP1P30622 Z94722.1-201ENST00000604328 474 ntBASIC-1.13□□□□□ -2.59
CLIP1P30622 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 SNORD68-201ENST00000363214 84 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 U8.6-201ENST00000364939 135 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 MIR320C1-201ENST00000408566 88 ntBASIC-1.14□□□□□ -2.59
CLIP1P30622 TIMM9P2-201ENST00000419324 266 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms