Protein–RNA interactions for Protein: P28908

TNFRSF8, Tumor necrosis factor receptor superfamily member 8, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8P28908 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TNFRSF8P28908 RNU6-1210P-201ENST00000363775 107 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 Y_RNA.217-201ENST00000364214 105 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 RNU6-1289P-201ENST00000384431 106 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 Y_RNA.498-201ENST00000384460 102 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 MIR29B2-201ENST00000385055 81 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 SNORA46.1-201ENST00000391069 153 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.3□□□□□ -2.04
TNFRSF8P28908 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.3□□□□□ -2.04
TNFRSF8P28908 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.3□□□□□ -2.04
TNFRSF8P28908 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TNFRSF8P28908 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.3□□□□□ -2.04
TNFRSF8P28908 AL021397.1-201ENST00000451806 248 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 Y_RNA.641-201ENST00000459414 105 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 AC024405.2-202ENST00000532731 184 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 AP002392.1-201ENST00000537692 208 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.3□□□□□ -2.04
TNFRSF8P28908 AL137100.2-201ENST00000555786 315 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 MIR1273D-201ENST00000577266 86 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
TNFRSF8P28908 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.3□□□□□ -2.04
TNFRSF8P28908 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.3□□□□□ -2.04
TNFRSF8P28908 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TNFRSF8P28908 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
TNFRSF8P28908 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TNFRSF8P28908 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.29□□□□□ -2.04
TNFRSF8P28908 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
TNFRSF8P28908 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.29□□□□□ -2.04
TNFRSF8P28908 RNU6-545P-201ENST00000362681 104 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 RNU6-47P-201ENST00000383866 107 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 RNU6-1310P-201ENST00000384153 107 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 SNORA48.3-201ENST00000391081 134 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 MIR320B2-201ENST00000408479 138 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 Y_RNA.590-201ENST00000410140 107 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 RNU2-54P-201ENST00000410299 190 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 AC004866.1-201ENST00000411748 78 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 AL392103.1-201ENST00000447000 198 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 AC245102.2-201ENST00000448956 180 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.29□□□□□ -2.04
TNFRSF8P28908 AL121594.1-201ENST00000475906 575 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 RNU6-406P-201ENST00000516470 107 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 RNA5SP137-201ENST00000516833 135 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.29□□□□□ -2.04
TNFRSF8P28908 DEFB131C-201ENST00000528817 165 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 EIF4A1P12-201ENST00000551910 141 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.29□□□□□ -2.04
TNFRSF8P28908 SNORD14A-201ENST00000606526 91 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 AC091932.3-201ENST00000624223 323 ntBASIC2.29□□□□□ -2.04
TNFRSF8P28908 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
TNFRSF8P28908 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TNFRSF8P28908 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TNFRSF8P28908 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TNFRSF8P28908 RNU6-746P-201ENST00000384112 109 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 RNU6-514P-201ENST00000384208 107 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 RNU1-148P-201ENST00000384472 162 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 MIR7-2-201ENST00000384970 110 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TNFRSF8P28908 COX6CP10-201ENST00000416832 224 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 HMGN2P38-201ENST00000423806 265 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 AC009237.7-201ENST00000447357 229 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 AC090515.1-201ENST00000465295 476 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.28□□□□□ -2.04
TNFRSF8P28908 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.28□□□□□ -2.04
TNFRSF8P28908 RNU6-191P-201ENST00000516295 94 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 RNU6-344P-201ENST00000516635 111 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 MIR4529-201ENST00000578110 78 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 AL713866.2-201ENST00000603579 219 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 MIR3674-201ENST00000636576 68 ntBASIC2.28□□□□□ -2.04
TNFRSF8P28908 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TNFRSF8P28908 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TNFRSF8P28908 RNU6-727P-201ENST00000363592 107 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 U3.9-201ENST00000363823 204 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 SNORA72.2-201ENST00000365028 127 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 RNU6-662P-201ENST00000384253 104 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 RNU6-918P-201ENST00000391219 106 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 SNORD23.1-201ENST00000408212 104 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 RNA5SP504-201ENST00000410676 117 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.27□□□□□ -2.05
TNFRSF8P28908 NDUFB4P10-201ENST00000452541 359 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 AC234781.5-201ENST00000508429 271 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 HMGB3P3-201ENST00000510526 400 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 Y_RNA.679-201ENST00000516416 91 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 RNU6-861P-201ENST00000516745 106 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 RNU6-255P-201ENST00000516957 105 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 RNU2-12P-201ENST00000517216 168 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.27□□□□□ -2.05
TNFRSF8P28908 AC021269.2-201ENST00000532318 330 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.27□□□□□ -2.05
TNFRSF8P28908 AL512605.2-201ENST00000592972 256 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 AC072026.1-201ENST00000605023 201 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.27□□□□□ -2.05
TNFRSF8P28908 TCL6_2.1-201ENST00000615162 119 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 AC073349.3-201ENST00000617616 186 ntBASIC2.27□□□□□ -2.05
TNFRSF8P28908 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TNFRSF8P28908 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TNFRSF8P28908 AC008555.8-201ENST00000623602 2168 ntBASIC2.26□□□□□ -2.05
TNFRSF8P28908 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.26□□□□□ -2.05
TNFRSF8P28908 RNU6-454P-201ENST00000364292 107 ntBASIC2.26□□□□□ -2.05
TNFRSF8P28908 RNU6-1264P-201ENST00000383891 107 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms