Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 RNA5SP285-201ENST00000516619 119 ntBASIC0.78□□□□□ -2.29
COL5A3P25940 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.78□□□□□ -2.29
COL5A3P25940 Y_RNA.718-201ENST00000517110 102 ntBASIC0.78□□□□□ -2.29
COL5A3P25940 MIR5094-201ENST00000578766 85 ntBASIC0.78□□□□□ -2.29
COL5A3P25940 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.78□□□□□ -2.29
COL5A3P25940 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.78□□□□□ -2.29
COL5A3P25940 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.78□□□□□ -2.29
COL5A3P25940 AL078604.3-201ENST00000615580 211 ntBASIC0.78□□□□□ -2.29
COL5A3P25940 AL590240.4-201ENST00000616908 390 ntBASIC0.78□□□□□ -2.29
COL5A3P25940 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.78□□□□□ -2.29
COL5A3P25940 AC067863.3-201ENST00000624172 122 ntBASIC0.78□□□□□ -2.29
COL5A3P25940 MIR340-201ENST00000362125 95 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 Y_RNA.142-201ENST00000363491 102 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 Y_RNA.160-201ENST00000363677 92 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 RNU6-1059P-201ENST00000363752 98 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 RNU4-9P-201ENST00000364951 139 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 RNA5SP475-201ENST00000410568 110 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 AC009237.7-201ENST00000447357 229 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 MTND5P20-201ENST00000448677 143 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 RPS20P10-201ENST00000451209 253 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 SNORD65B-201ENST00000459126 73 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 AL163195.1-201ENST00000496941 348 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 HMGN1P13-201ENST00000505795 138 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 AC097473.1-201ENST00000508142 408 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.77□□□□□ -2.29
COL5A3P25940 RNU6-470P-201ENST00000515954 104 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 Y_RNA.706-201ENST00000516933 99 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 RNU6-264P-201ENST00000517134 104 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 AC105029.1-201ENST00000520250 669 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 AC027288.2-201ENST00000553028 243 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.77□□□□□ -2.29
COL5A3P25940 MIR4753-201ENST00000585119 83 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 AC060780.3-201ENST00000589464 80 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 AC025253.1-201ENST00000613623 543 ntBASIC0.77□□□□□ -2.29
COL5A3P25940 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
COL5A3P25940 Y_RNA.72-201ENST00000362894 103 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 RNU6-1305P-201ENST00000364353 104 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 RNU6-1019P-201ENST00000364424 107 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 RNU6-1240P-201ENST00000365155 104 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 Y_RNA.387-201ENST00000383918 102 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 Y_RNA.557-201ENST00000384680 107 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 MIR586-201ENST00000385035 97 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
COL5A3P25940 SNORA69.1-201ENST00000390904 137 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 MIR1267-201ENST00000408723 78 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 ELOCP21-201ENST00000412558 336 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.76□□□□□ -2.29
COL5A3P25940 AC099677.2-201ENST00000436385 175 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.76□□□□□ -2.29
COL5A3P25940 AC093019.1-201ENST00000443135 252 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 UBE2V1P7-201ENST00000446395 340 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 RNU1-131P-201ENST00000458943 161 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 AC011406.1-201ENST00000512440 370 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 AC074133.1-201ENST00000515696 183 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 RNU6-1041P-201ENST00000516254 102 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 SCARNA16.2-201ENST00000516520 172 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.76□□□□□ -2.29
COL5A3P25940 MIR5589-201ENST00000579442 60 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 MIR4801-201ENST00000582704 82 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 AP001485.1-201ENST00000604799 199 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 AC010999.1-201ENST00000611856 324 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 AC243829.6-201ENST00000612652 106 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.76□□□□□ -2.29
COL5A3P25940 AC243829.3-201ENST00000622177 108 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.76□□□□□ -2.29
COL5A3P25940 AC068205.3-201ENST00000636385 468 ntBASIC0.76□□□□□ -2.29
COL5A3P25940 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.75□□□□□ -2.29
COL5A3P25940 Y_RNA.166-201ENST00000363730 102 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 SNORD87-201ENST00000364849 89 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 Y_RNA.319-201ENST00000365138 92 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 RNY3P14-201ENST00000384309 102 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.75□□□□□ -2.29
COL5A3P25940 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.75□□□□□ -2.29
COL5A3P25940 Y_RNA.653-201ENST00000459091 95 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 RNU6-221P-201ENST00000459541 99 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.75□□□□□ -2.29
COL5A3P25940 RNU6-120P-201ENST00000516077 103 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 RNVU1-2-201ENST00000516326 135 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 Y_RNA.708-201ENST00000516950 96 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 MIR2355-201ENST00000517199 87 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 DEFB131C-201ENST00000528817 165 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.75□□□□□ -2.29
COL5A3P25940 AC005562.2-201ENST00000618264 111 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 AC099654.14-201ENST00000638599 341 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 Y_RNA.577-201ENST00000384794 101 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 MIR597-201ENST00000384968 97 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 MIR548B-201ENST00000385247 97 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 RNA5SP511-201ENST00000410487 115 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 AC114482.1-201ENST00000418010 247 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.75□□□□□ -2.29
COL5A3P25940 EIF1P2-201ENST00000428233 350 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 AC073910.1-201ENST00000445047 438 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 NDUFB4P10-201ENST00000452541 359 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 U8.22-201ENST00000459141 133 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 MIR2053-201ENST00000459295 91 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 RNU7-87P-201ENST00000459343 62 ntBASIC0.75□□□□□ -2.29
COL5A3P25940 RNU7-169P-201ENST00000459456 61 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms