Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MIR4778-201ENST00000577635 80 ntBASIC1.39□□□□□ -2.19
BDNFP23560 AC127459.3-201ENST00000624328 466 ntBASIC1.39□□□□□ -2.19
BDNFP23560 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.38□□□□□ -2.19
BDNFP23560 SNORD12-201ENST00000391002 90 ntBASIC1.38□□□□□ -2.19
BDNFP23560 FCF1P9-201ENST00000412546 282 ntBASIC1.38□□□□□ -2.19
BDNFP23560 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.38□□□□□ -2.19
BDNFP23560 AL353997.1-201ENST00000432936 108 ntBASIC1.38□□□□□ -2.19
BDNFP23560 AC091021.1-201ENST00000468051 388 ntBASIC1.38□□□□□ -2.19
BDNFP23560 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.38□□□□□ -2.19
BDNFP23560 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.38□□□□□ -2.19
BDNFP23560 RNU7-12P-201ENST00000516030 62 ntBASIC1.38□□□□□ -2.19
BDNFP23560 Y_RNA.670-201ENST00000516255 105 ntBASIC1.38□□□□□ -2.19
BDNFP23560 RNU6-165P-201ENST00000517170 99 ntBASIC1.38□□□□□ -2.19
BDNFP23560 MIR4781-201ENST00000585250 76 ntBASIC1.38□□□□□ -2.19
BDNFP23560 AC060780.3-201ENST00000589464 80 ntBASIC1.38□□□□□ -2.19
BDNFP23560 AC009229.3-201ENST00000608056 282 ntBASIC1.38□□□□□ -2.19
BDNFP23560 AC092794.2-201ENST00000620933 563 ntBASIC1.38□□□□□ -2.19
BDNFP23560 RNU6-1054P-201ENST00000411293 104 ntBASIC1.37□□□□□ -2.19
BDNFP23560 AL137792.2-201ENST00000443484 235 ntBASIC1.37□□□□□ -2.19
BDNFP23560 RPL17P19-201ENST00000489069 552 ntBASIC1.37□□□□□ -2.19
BDNFP23560 SNORA70.12-201ENST00000516084 153 ntBASIC1.37□□□□□ -2.19
BDNFP23560 AC007014.2-201ENST00000615581 479 ntBASIC1.37□□□□□ -2.19
BDNFP23560 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
BDNFP23560 Y_RNA.358-201ENST00000365491 99 ntBASIC1.36□□□□□ -2.19
BDNFP23560 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
BDNFP23560 AC114482.1-201ENST00000418010 247 ntBASIC1.36□□□□□ -2.19
BDNFP23560 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.36□□□□□ -2.19
BDNFP23560 AL049830.1-201ENST00000468034 425 ntBASIC1.36□□□□□ -2.19
BDNFP23560 RPS23P4-201ENST00000487908 423 ntBASIC1.36□□□□□ -2.19
BDNFP23560 AC022493.2-201ENST00000506122 481 ntBASIC1.36□□□□□ -2.19
BDNFP23560 AC011352.1-201ENST00000512300 793 ntBASIC1.36□□□□□ -2.19
BDNFP23560 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
BDNFP23560 AC091178.2-201ENST00000584401 117 ntBASIC1.36□□□□□ -2.19
BDNFP23560 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
BDNFP23560 HSPE1P19-201ENST00000603327 295 ntBASIC1.36□□□□□ -2.19
BDNFP23560 U6.115-201ENST00000636045 103 ntBASIC1.36□□□□□ -2.19
BDNFP23560 RNU4-79P-201ENST00000362764 141 ntBASIC1.35□□□□□ -2.19
BDNFP23560 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.35□□□□□ -2.19
BDNFP23560 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
BDNFP23560 SNORA12.1-201ENST00000390873 148 ntBASIC1.35□□□□□ -2.19
BDNFP23560 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.35□□□□□ -2.19
BDNFP23560 OR9P1P-201ENST00000496431 281 ntBASIC1.35□□□□□ -2.19
BDNFP23560 SNORA40.9-201ENST00000515895 93 ntBASIC1.35□□□□□ -2.19
BDNFP23560 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.35□□□□□ -2.19
BDNFP23560 RNA5SP361-201ENST00000362686 118 ntBASIC1.34□□□□□ -2.19
BDNFP23560 CALM2P4-201ENST00000430810 426 ntBASIC1.34□□□□□ -2.19
BDNFP23560 DYNLT3P2-201ENST00000442517 295 ntBASIC1.34□□□□□ -2.19
BDNFP23560 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
BDNFP23560 RNU6-358P-201ENST00000516564 75 ntBASIC1.34□□□□□ -2.19
BDNFP23560 AL391516.1-201ENST00000554380 2449 ntBASIC1.34□□□□□ -2.2
BDNFP23560 SNORA1B-201ENST00000362535 133 ntBASIC1.33□□□□□ -2.2
BDNFP23560 MIR625-201ENST00000385047 85 ntBASIC1.33□□□□□ -2.2
BDNFP23560 U8.16-201ENST00000391279 133 ntBASIC1.33□□□□□ -2.2
BDNFP23560 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.33□□□□□ -2.2
BDNFP23560 MTND3P10-201ENST00000450967 341 ntBASIC1.33□□□□□ -2.2
BDNFP23560 UBL5P1-201ENST00000507979 193 ntBASIC1.33□□□□□ -2.2
BDNFP23560 Y_RNA.676-201ENST00000516393 96 ntBASIC1.33□□□□□ -2.2
BDNFP23560 RNU6-264P-201ENST00000517134 104 ntBASIC1.33□□□□□ -2.2
BDNFP23560 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.33□□□□□ -2.2
BDNFP23560 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
BDNFP23560 AC136932.1-201ENST00000574771 208 ntBASIC1.33□□□□□ -2.2
BDNFP23560 MIR4661-201ENST00000582720 75 ntBASIC1.33□□□□□ -2.2
BDNFP23560 AC005828.6-201ENST00000606610 232 ntBASIC1.33□□□□□ -2.2
BDNFP23560 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.33□□□□□ -2.2
BDNFP23560 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
BDNFP23560 RNY1P10-201ENST00000363268 113 ntBASIC1.32□□□□□ -2.2
BDNFP23560 RNU6-392P-201ENST00000364926 101 ntBASIC1.32□□□□□ -2.2
BDNFP23560 MIR19B1-201ENST00000384829 87 ntBASIC1.32□□□□□ -2.2
BDNFP23560 RNU6-910P-201ENST00000390844 107 ntBASIC1.32□□□□□ -2.2
BDNFP23560 AC245047.7-201ENST00000440265 293 ntBASIC1.32□□□□□ -2.2
BDNFP23560 AC233266.1-201ENST00000454518 96 ntBASIC1.32□□□□□ -2.2
BDNFP23560 LINC01399-202ENST00000458450 244 ntBASIC1.32□□□□□ -2.2
BDNFP23560 MIR2053-201ENST00000459295 91 ntBASIC1.32□□□□□ -2.2
BDNFP23560 RPL7P42-201ENST00000481005 679 ntBASIC1.32□□□□□ -2.2
BDNFP23560 RNU6-947P-201ENST00000516264 106 ntBASIC1.32□□□□□ -2.2
BDNFP23560 AC006380.1-201ENST00000603598 186 ntBASIC1.32□□□□□ -2.2
BDNFP23560 AC080078.3-201ENST00000605407 463 ntBASIC1.32□□□□□ -2.2
BDNFP23560 MIR6078-201ENST00000611069 100 ntBASIC1.32□□□□□ -2.2
BDNFP23560 AC242852.1-201ENST00000612151 96 ntBASIC1.32□□□□□ -2.2
BDNFP23560 AL357075.2-201ENST00000614906 189 ntBASIC1.32□□□□□ -2.2
BDNFP23560 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.32□□□□□ -2.2
BDNFP23560 AC244015.1-201ENST00000622301 99 ntBASIC1.32□□□□□ -2.2
BDNFP23560 AC027514.1-201ENST00000588561 1603 ntBASIC1.32□□□□□ -2.2
BDNFP23560 MIR337-201ENST00000362281 93 ntBASIC1.31□□□□□ -2.2
BDNFP23560 Y_RNA.339-201ENST00000365325 102 ntBASIC1.31□□□□□ -2.2
BDNFP23560 RNU6-53P-201ENST00000365367 106 ntBASIC1.31□□□□□ -2.2
BDNFP23560 RNU6-767P-201ENST00000384132 107 ntBASIC1.31□□□□□ -2.2
BDNFP23560 Y_RNA.473-201ENST00000384333 102 ntBASIC1.31□□□□□ -2.2
BDNFP23560 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
BDNFP23560 SNORD12B-201ENST00000410433 91 ntBASIC1.31□□□□□ -2.2
BDNFP23560 OR2A41P-201ENST00000473586 105 ntBASIC1.31□□□□□ -2.2
BDNFP23560 RNU6-1291P-201ENST00000516591 104 ntBASIC1.31□□□□□ -2.2
BDNFP23560 AC091895.1-201ENST00000624494 256 ntBASIC1.31□□□□□ -2.2
BDNFP23560 Y_RNA.88-201ENST00000363029 99 ntBASIC1.3□□□□□ -2.2
BDNFP23560 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.3□□□□□ -2.2
BDNFP23560 RNU6-1105P-201ENST00000384774 107 ntBASIC1.3□□□□□ -2.2
BDNFP23560 SNORA75.4-201ENST00000391278 119 ntBASIC1.3□□□□□ -2.2
BDNFP23560 MIR891A-201ENST00000401237 79 ntBASIC1.3□□□□□ -2.2
BDNFP23560 RNU5A-5P-201ENST00000411054 116 ntBASIC1.3□□□□□ -2.2
BDNFP23560 AC063976.4-201ENST00000421971 163 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms