Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CDH3P22223 Y_RNA.101-201ENST00000363154 102 ntBASIC1.66□□□□□ -2.14
CDH3P22223 RNU6-626P-201ENST00000363354 107 ntBASIC1.66□□□□□ -2.14
CDH3P22223 RNU6-1019P-201ENST00000364424 107 ntBASIC1.66□□□□□ -2.14
CDH3P22223 SNORD48-201ENST00000364953 64 ntBASIC1.66□□□□□ -2.14
CDH3P22223 RNA5SP190-201ENST00000365222 118 ntBASIC1.66□□□□□ -2.14
CDH3P22223 SNORD14.1-201ENST00000365609 90 ntBASIC1.66□□□□□ -2.14
CDH3P22223 RNU6-1310P-201ENST00000384153 107 ntBASIC1.66□□□□□ -2.14
CDH3P22223 MRPL42P3-201ENST00000401492 326 ntBASIC1.66□□□□□ -2.14
CDH3P22223 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.66□□□□□ -2.14
CDH3P22223 RPEP5-201ENST00000441137 268 ntBASIC1.66□□□□□ -2.14
CDH3P22223 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.66□□□□□ -2.14
CDH3P22223 AC010598.1-201ENST00000510378 103 ntBASIC1.66□□□□□ -2.14
CDH3P22223 RNU6-966P-201ENST00000516479 104 ntBASIC1.66□□□□□ -2.14
CDH3P22223 SNORA31.17-201ENST00000516953 127 ntBASIC1.66□□□□□ -2.14
CDH3P22223 AC027419.1-201ENST00000522976 328 ntBASIC1.66□□□□□ -2.14
CDH3P22223 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.66□□□□□ -2.14
CDH3P22223 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.66□□□□□ -2.14
CDH3P22223 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.66□□□□□ -2.14
CDH3P22223 AL390123.1-201ENST00000603216 237 ntBASIC1.66□□□□□ -2.14
CDH3P22223 AL121655.1-201ENST00000605811 308 ntBASIC1.66□□□□□ -2.14
CDH3P22223 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.66□□□□□ -2.14
CDH3P22223 PART1_1.1-201ENST00000611761 217 ntBASIC1.66□□□□□ -2.14
CDH3P22223 AC022140.2-201ENST00000623500 188 ntBASIC1.66□□□□□ -2.14
CDH3P22223 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
CDH3P22223 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CDH3P22223 Y_RNA.243-201ENST00000364481 109 ntBASIC1.65□□□□□ -2.15
CDH3P22223 Y_RNA.526-201ENST00000384572 110 ntBASIC1.65□□□□□ -2.15
CDH3P22223 MIR515-2-201ENST00000384883 83 ntBASIC1.65□□□□□ -2.15
CDH3P22223 MIR515-1-201ENST00000384884 83 ntBASIC1.65□□□□□ -2.15
CDH3P22223 RNU6-130P-201ENST00000411112 103 ntBASIC1.65□□□□□ -2.15
CDH3P22223 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.65□□□□□ -2.15
CDH3P22223 MRPS10P1-201ENST00000448483 130 ntBASIC1.65□□□□□ -2.15
CDH3P22223 RNA5SP437-201ENST00000517249 129 ntBASIC1.65□□□□□ -2.15
CDH3P22223 AC023157.2-201ENST00000540596 141 ntBASIC1.65□□□□□ -2.15
CDH3P22223 AC005176.2-201ENST00000596933 147 ntBASIC1.65□□□□□ -2.15
CDH3P22223 AL356055.1-201ENST00000602528 446 ntBASIC1.65□□□□□ -2.15
CDH3P22223 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.65□□□□□ -2.15
CDH3P22223 U6.73-201ENST00000619194 103 ntBASIC1.65□□□□□ -2.15
CDH3P22223 AC006435.5-201ENST00000624486 112 ntBASIC1.65□□□□□ -2.15
CDH3P22223 AC010615.1-201ENST00000594254 1764 ntBASIC1.64□□□□□ -2.15
CDH3P22223 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CDH3P22223 SNORD115-30-201ENST00000364117 82 ntBASIC1.64□□□□□ -2.15
CDH3P22223 SNORA63D-201ENST00000364359 132 ntBASIC1.64□□□□□ -2.15
CDH3P22223 RNU4-50P-201ENST00000364361 141 ntBASIC1.64□□□□□ -2.15
CDH3P22223 RNU6-450P-201ENST00000364654 107 ntBASIC1.64□□□□□ -2.15
CDH3P22223 Y_RNA.361-201ENST00000365515 120 ntBASIC1.64□□□□□ -2.15
CDH3P22223 RNU6-1227P-201ENST00000383981 107 ntBASIC1.64□□□□□ -2.15
CDH3P22223 Y_RNA.471-201ENST00000384312 102 ntBASIC1.64□□□□□ -2.15
CDH3P22223 RNU6-823P-201ENST00000391042 103 ntBASIC1.64□□□□□ -2.15
CDH3P22223 RNU6-1199P-201ENST00000411249 104 ntBASIC1.64□□□□□ -2.15
CDH3P22223 AC005002.2-201ENST00000438228 269 ntBASIC1.64□□□□□ -2.15
CDH3P22223 SNORD13-201ENST00000459299 104 ntBASIC1.64□□□□□ -2.15
CDH3P22223 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.64□□□□□ -2.15
CDH3P22223 AL137100.2-201ENST00000555786 315 ntBASIC1.64□□□□□ -2.15
CDH3P22223 MIR3684-201ENST00000579779 74 ntBASIC1.64□□□□□ -2.15
CDH3P22223 MIR3683-201ENST00000580847 82 ntBASIC1.64□□□□□ -2.15
CDH3P22223 MIR4423-201ENST00000580922 80 ntBASIC1.64□□□□□ -2.15
CDH3P22223 AC016925.2-201ENST00000605108 242 ntBASIC1.64□□□□□ -2.15
CDH3P22223 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
CDH3P22223 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.64□□□□□ -2.15
CDH3P22223 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CDH3P22223 SNORA27.1-201ENST00000362604 124 ntBASIC1.63□□□□□ -2.15
CDH3P22223 Y_RNA.124-201ENST00000363339 93 ntBASIC1.63□□□□□ -2.15
CDH3P22223 Y_RNA.230-201ENST00000364348 109 ntBASIC1.63□□□□□ -2.15
CDH3P22223 SNORA72.2-201ENST00000365028 127 ntBASIC1.63□□□□□ -2.15
CDH3P22223 RNU6-338P-201ENST00000383888 105 ntBASIC1.63□□□□□ -2.15
CDH3P22223 Y_RNA.424-201ENST00000384063 103 ntBASIC1.63□□□□□ -2.15
CDH3P22223 Y_RNA.570-201ENST00000384750 101 ntBASIC1.63□□□□□ -2.15
CDH3P22223 RNU2-54P-201ENST00000410299 190 ntBASIC1.63□□□□□ -2.15
CDH3P22223 AC005534.2-201ENST00000431047 433 ntBASIC1.63□□□□□ -2.15
CDH3P22223 RPS26P45-201ENST00000471748 340 ntBASIC1.63□□□□□ -2.15
CDH3P22223 AL163195.1-201ENST00000496941 348 ntBASIC1.63□□□□□ -2.15
CDH3P22223 AC024995.1-201ENST00000523014 93 ntBASIC1.63□□□□□ -2.15
CDH3P22223 MIR4438-201ENST00000585271 93 ntBASIC1.63□□□□□ -2.15
CDH3P22223 AC124312.5-201ENST00000604451 268 ntBASIC1.63□□□□□ -2.15
CDH3P22223 Y_RNA.772-201ENST00000606692 102 ntBASIC1.63□□□□□ -2.15
CDH3P22223 AL359075.3-201ENST00000613288 217 ntBASIC1.63□□□□□ -2.15
CDH3P22223 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CDH3P22223 RNU6-694P-201ENST00000364071 147 ntBASIC1.62□□□□□ -2.15
CDH3P22223 Y_RNA.446-201ENST00000384178 104 ntBASIC1.62□□□□□ -2.15
CDH3P22223 MIR520A-201ENST00000384862 85 ntBASIC1.62□□□□□ -2.15
CDH3P22223 RNU6-1186P-201ENST00000410429 97 ntBASIC1.62□□□□□ -2.15
CDH3P22223 EBAG9P1-201ENST00000418955 543 ntBASIC1.62□□□□□ -2.15
CDH3P22223 AL606517.2-201ENST00000442855 241 ntBASIC1.62□□□□□ -2.15
CDH3P22223 U8.20-201ENST00000459445 131 ntBASIC1.62□□□□□ -2.15
CDH3P22223 RPS27P22-201ENST00000478056 241 ntBASIC1.62□□□□□ -2.15
CDH3P22223 AC097462.1-201ENST00000514125 324 ntBASIC1.62□□□□□ -2.15
CDH3P22223 Y_RNA.715-201ENST00000517082 110 ntBASIC1.62□□□□□ -2.15
CDH3P22223 AC022616.4-201ENST00000522985 181 ntBASIC1.62□□□□□ -2.15
CDH3P22223 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDH3P22223 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH3P22223 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
CDH3P22223 RNU1-22P-201ENST00000363334 158 ntBASIC1.61□□□□□ -2.15
CDH3P22223 Y_RNA.140-201ENST00000363474 103 ntBASIC1.61□□□□□ -2.15
CDH3P22223 Y_RNA.158-201ENST00000363651 101 ntBASIC1.61□□□□□ -2.15
CDH3P22223 RNU6-1175P-201ENST00000365200 107 ntBASIC1.61□□□□□ -2.15
CDH3P22223 RNU6-407P-201ENST00000365280 104 ntBASIC1.61□□□□□ -2.15
CDH3P22223 Y_RNA.439-201ENST00000384119 94 ntBASIC1.61□□□□□ -2.15
CDH3P22223 Y_RNA.551-201ENST00000384661 102 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms