Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU6-965P-201ENST00000516721 96 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNA5SP330-201ENST00000517096 96 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU6-988P-201ENST00000519081 107 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AC125232.2-201ENST00000592457 143 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AL138963.2-201ENST00000605137 226 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AC022513.1-201ENST00000624512 117 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 Y_RNA.202-201ENST00000364083 110 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU4-50P-201ENST00000364361 141 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 Y_RNA.319-201ENST00000365138 92 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 SNORA36A-201ENST00000384221 132 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU6-318P-201ENST00000384283 103 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 MIR561-201ENST00000385216 97 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 MIR628-201ENST00000385229 95 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AL357139.1-201ENST00000407792 426 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 MIR320B2-201ENST00000408479 138 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AL590135.1-201ENST00000422215 156 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AC019205.3-201ENST00000424573 156 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AL358176.2-201ENST00000425769 204 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AC096644.2-201ENST00000429278 159 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AC016700.2-201ENST00000446011 156 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 RNU7-87P-201ENST00000459343 62 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.05□□□□□ -2.24
COL5A1P20908 RNU6-1143P-201ENST00000516125 104 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.05□□□□□ -2.24
COL5A1P20908 CYP3A137P-201ENST00000562436 69 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 MIR376A1-201ENST00000616574 68 ntBASIC1.05□□□□□ -2.24
COL5A1P20908 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.05□□□□□ -2.24
COL5A1P20908 RNU6-486P-201ENST00000363116 107 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 RNU6-727P-201ENST00000363592 107 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 RNY3P11-201ENST00000364153 102 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC117470.1-201ENST00000381974 330 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 RNU6-546P-201ENST00000383991 107 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 Y_RNA.455-201ENST00000384230 98 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 MIR186-201ENST00000384988 86 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 MIR487A-201ENST00000385009 80 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 MIR549A-201ENST00000385268 96 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 SNORD12B-201ENST00000410433 91 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 Y_RNA.605-201ENST00000410577 105 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC004866.1-201ENST00000411748 78 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.04□□□□□ -2.24
COL5A1P20908 AC092423.1-201ENST00000430165 186 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.04□□□□□ -2.24
COL5A1P20908 RPEP5-201ENST00000441137 268 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AL731563.1-201ENST00000442202 214 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 DYNLT3P2-201ENST00000442517 295 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC073910.1-201ENST00000445047 438 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AL118496.2-201ENST00000448300 230 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC112492.4-201ENST00000456549 352 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC105758.1-201ENST00000506038 399 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC093259.1-201ENST00000509755 300 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 RNU6-475P-201ENST00000516073 104 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 RNU6-58P-201ENST00000517143 103 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC018630.3-201ENST00000542637 96 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.04□□□□□ -2.24
COL5A1P20908 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC073410.2-201ENST00000603240 332 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC006380.1-201ENST00000603598 186 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 SNORD14A-201ENST00000606526 91 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 AC108706.1-201ENST00000611053 297 ntBASIC1.04□□□□□ -2.24
COL5A1P20908 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
COL5A1P20908 Y_RNA.26-201ENST00000362539 101 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 RNU1-72P-201ENST00000362976 153 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 Y_RNA.148-201ENST00000363557 117 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 RNU6-806P-201ENST00000365147 105 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 RNU6-716P-201ENST00000365621 103 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 SNORA67.2-201ENST00000384300 149 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 SNORD78.2-201ENST00000391076 69 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 MIR190B-201ENST00000401119 79 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 RNU2-48P-201ENST00000410694 191 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 ELOCP21-201ENST00000412558 336 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 SNORA4.4-201ENST00000515921 135 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 RNU4-77P-201ENST00000516692 156 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 Y_RNA.713-201ENST00000517013 96 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 MIR5701-3-201ENST00000578890 82 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 MIR5701-1-201ENST00000585138 82 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 AC005034.5-201ENST00000604219 466 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 AL121655.1-201ENST00000605811 308 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 MIR5701-2-201ENST00000615634 82 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 7SK.10-201ENST00000621414 298 ntBASIC1.03□□□□□ -2.24
COL5A1P20908 Y_RNA.47-201ENST00000362697 108 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 Y_RNA.551-201ENST00000384661 102 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 MIR215-201ENST00000384858 110 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 MIR1283-1-201ENST00000408494 87 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 RNU6-130P-201ENST00000411112 103 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.03□□□□□ -2.25
COL5A1P20908 AC009237.7-201ENST00000447357 229 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.03□□□□□ -2.25
COL5A1P20908 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.03□□□□□ -2.25
COL5A1P20908 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
COL5A1P20908 RNU7-193P-201ENST00000516723 65 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 RNU6-586P-201ENST00000517265 104 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.03□□□□□ -2.25
COL5A1P20908 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.03□□□□□ -2.25
COL5A1P20908 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.03□□□□□ -2.25
COL5A1P20908 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.03□□□□□ -2.25
COL5A1P20908 AL590095.2-201ENST00000604136 117 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 AC103810.8-201ENST00000607347 118 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.03□□□□□ -2.25
COL5A1P20908 AC068205.3-201ENST00000636385 468 ntBASIC1.03□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms