Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL513477.1-202ENST00000417061 214 ntBASIC2.81□□□□□ -1.96
PTPN1P18031 AC123900.1-201ENST00000420390 96 ntBASIC2.81□□□□□ -1.96
PTPN1P18031 AC003685.2-201ENST00000422795 395 ntBASIC2.81□□□□□ -1.96
PTPN1P18031 RN7SL297P-201ENST00000483161 293 ntBASIC2.81□□□□□ -1.96
PTPN1P18031 AC010409.1-201ENST00000487382 476 ntBASIC2.81□□□□□ -1.96
PTPN1P18031 AC117454.1-201ENST00000491120 168 ntBASIC2.81□□□□□ -1.96
PTPN1P18031 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.81□□□□□ -1.96
PTPN1P18031 Y_RNA.797-201ENST00000515977 94 ntBASIC2.81□□□□□ -1.96
PTPN1P18031 MTND5P41-201ENST00000517498 206 ntBASIC2.81□□□□□ -1.96
PTPN1P18031 MIR4635-201ENST00000583759 79 ntBASIC2.81□□□□□ -1.96
PTPN1P18031 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTPN1P18031 Y_RNA.23-201ENST00000362496 106 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 RNU6-103P-201ENST00000363686 107 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 Y_RNA.398-201ENST00000383952 99 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PTPN1P18031 RNA5SP492-201ENST00000411330 114 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 AC010154.1-201ENST00000425857 269 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 CR769767.1-201ENST00000436337 346 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 RPL36AP21-201ENST00000490372 323 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 RNU7-200P-201ENST00000516105 62 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 RNU7-115P-201ENST00000516433 55 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 MIR5688-201ENST00000580619 83 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 MIR3117-201ENST00000584034 78 ntBASIC2.8□□□□□ -1.96
PTPN1P18031 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.8□□□□□ -1.96
PTPN1P18031 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.8□□□□□ -1.96
PTPN1P18031 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PTPN1P18031 AC138915.1-201ENST00000565427 1685 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.79□□□□□ -1.96
PTPN1P18031 Y_RNA.272-201ENST00000364696 102 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 RNU6-275P-201ENST00000364910 107 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 RNU6-969P-201ENST00000383900 105 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 Y_RNA.572-201ENST00000384757 98 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.79□□□□□ -1.96
PTPN1P18031 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.79□□□□□ -1.96
PTPN1P18031 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.79□□□□□ -1.96
PTPN1P18031 SNORA4.4-201ENST00000515921 135 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.79□□□□□ -1.96
PTPN1P18031 MIR4724-201ENST00000579485 89 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 MIR4744-201ENST00000581563 82 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 AP003357.1-201ENST00000604497 148 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 AC005972.2-201ENST00000604690 348 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.79□□□□□ -1.96
PTPN1P18031 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PTPN1P18031 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
PTPN1P18031 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PTPN1P18031 CENPCP1-201ENST00000533085 2578 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 MIR449A-201ENST00000362113 91 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 MIR367-201ENST00000362299 68 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 RNU6-1323P-201ENST00000384025 107 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 SNORA36B-201ENST00000410438 131 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 SEPT7P4-201ENST00000437076 306 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 RPS27P22-201ENST00000478056 241 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 AC005840.1-201ENST00000498412 377 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.78□□□□□ -1.96
PTPN1P18031 RNA5SP282-201ENST00000516355 108 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 RNU6-63P-201ENST00000516690 95 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 RNU6-667P-201ENST00000517186 102 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.78□□□□□ -1.96
PTPN1P18031 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.78□□□□□ -1.96
PTPN1P18031 MIR3910-1-201ENST00000580936 111 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 MIR4298-201ENST00000584380 73 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 POLR3GP1-201ENST00000594073 261 ntBASIC2.78□□□□□ -1.96
PTPN1P18031 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
PTPN1P18031 SNORD56.5-201ENST00000364281 72 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 RNA5SP125-201ENST00000364843 120 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 Y_RNA.357-201ENST00000365487 109 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 MIR616-201ENST00000385293 97 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 RNU6-578P-201ENST00000390980 103 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 Y_RNA.580-201ENST00000391004 95 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 AL135786.1-201ENST00000415892 214 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 AC018868.1-201ENST00000491307 315 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 RNU7-116P-201ENST00000516940 62 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 RNU6-856P-201ENST00000516959 98 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 AC127455.1-201ENST00000565496 145 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PTPN1P18031 AL136360.1-201ENST00000503377 1900 ntBASIC2.77□□□□□ -1.97
PTPN1P18031 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PTPN1P18031 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.76□□□□□ -1.97
PTPN1P18031 AL157777.2-201ENST00000258070 137 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 RNA5SP68-201ENST00000363885 119 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 RNU4-84P-201ENST00000364200 139 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 RNU6-117P-201ENST00000365415 107 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 SNORD116-18-201ENST00000383961 92 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 MIR592-201ENST00000384959 97 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 EBAG9P1-201ENST00000418955 543 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN1P18031 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN1P18031 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.76□□□□□ -1.97
PTPN1P18031 SCARNA8-201ENST00000515924 131 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 RNU6-346P-201ENST00000516288 111 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 RNU6-1007P-201ENST00000516586 107 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 RNU6-453P-201ENST00000516819 85 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 RNU6-826P-201ENST00000516827 104 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 AL391903.3-201ENST00000612158 163 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 MTND1P7-201ENST00000632801 297 ntBASIC2.76□□□□□ -1.97
PTPN1P18031 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PTPN1P18031 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms