Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 SNORA20.3-201ENST00000516880 132 ntBASIC1.95□□□□□ -2.1
HMGB1P09429 RNU6-1096P-201ENST00000517089 102 ntBASIC1.95□□□□□ -2.1
HMGB1P09429 MIR3683-201ENST00000580847 82 ntBASIC1.95□□□□□ -2.1
HMGB1P09429 AC006380.1-201ENST00000603598 186 ntBASIC1.95□□□□□ -2.1
HMGB1P09429 AL513534.2-201ENST00000603836 250 ntBASIC1.95□□□□□ -2.1
HMGB1P09429 AC099654.14-201ENST00000638599 341 ntBASIC1.95□□□□□ -2.1
HMGB1P09429 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGB1P09429 Y_RNA.243-201ENST00000364481 109 ntBASIC1.94□□□□□ -2.1
HMGB1P09429 Y_RNA.474-201ENST00000384341 102 ntBASIC1.94□□□□□ -2.1
HMGB1P09429 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.94□□□□□ -2.1
HMGB1P09429 OR9P1P-201ENST00000496431 281 ntBASIC1.94□□□□□ -2.1
HMGB1P09429 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB1P09429 AC005828.6-201ENST00000606610 232 ntBASIC1.94□□□□□ -2.1
HMGB1P09429 MTND4LP32-201ENST00000636111 270 ntBASIC1.94□□□□□ -2.1
HMGB1P09429 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMGB1P09429 Y_RNA.259-201ENST00000364619 101 ntBASIC1.93□□□□□ -2.1
HMGB1P09429 RNU6-1297P-201ENST00000384415 104 ntBASIC1.93□□□□□ -2.1
HMGB1P09429 MIR520G-201ENST00000385064 90 ntBASIC1.93□□□□□ -2.1
HMGB1P09429 MIR628-201ENST00000385229 95 ntBASIC1.93□□□□□ -2.1
HMGB1P09429 RNA5SP482-201ENST00000391269 118 ntBASIC1.93□□□□□ -2.1
HMGB1P09429 AL627390.1-201ENST00000396055 340 ntBASIC1.93□□□□□ -2.1
HMGB1P09429 snoU13.26-201ENST00000459452 105 ntBASIC1.93□□□□□ -2.1
HMGB1P09429 RNU6-947P-201ENST00000516264 106 ntBASIC1.93□□□□□ -2.1
HMGB1P09429 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMGB1P09429 Y_RNA.621-201ENST00000411065 96 ntBASIC1.92□□□□□ -2.1
HMGB1P09429 MRPS18CP6-201ENST00000423587 223 ntBASIC1.92□□□□□ -2.1
HMGB1P09429 FCF1P4-201ENST00000448326 183 ntBASIC1.92□□□□□ -2.1
HMGB1P09429 HSPE1P13-201ENST00000451143 297 ntBASIC1.92□□□□□ -2.1
HMGB1P09429 SNORA25.15-201ENST00000516487 89 ntBASIC1.92□□□□□ -2.1
HMGB1P09429 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.92□□□□□ -2.1
HMGB1P09429 Y_RNA.142-201ENST00000363491 102 ntBASIC1.91□□□□□ -2.1
HMGB1P09429 RNU6-117P-201ENST00000365415 107 ntBASIC1.91□□□□□ -2.1
HMGB1P09429 MIR222-201ENST00000384992 110 ntBASIC1.91□□□□□ -2.1
HMGB1P09429 RN7SKP101-201ENST00000411376 320 ntBASIC1.91□□□□□ -2.1
HMGB1P09429 RNU6-165P-201ENST00000517170 99 ntBASIC1.91□□□□□ -2.1
HMGB1P09429 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.91□□□□□ -2.1
HMGB1P09429 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
HMGB1P09429 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.91□□□□□ -2.1
HMGB1P09429 RNU6-322P-201ENST00000516010 103 ntBASIC1.9□□□□□ -2.11
HMGB1P09429 AC008269.2-201ENST00000561915 1105 ntBASIC1.9□□□□□ -2.11
HMGB1P09429 AC055872.1-201ENST00000570978 278 ntBASIC1.9□□□□□ -2.11
HMGB1P09429 GHRLOS.1-201ENST00000610995 70 ntBASIC1.9□□□□□ -2.11
HMGB1P09429 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGB1P09429 Y_RNA.384-201ENST00000383909 102 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 Y_RNA.390-201ENST00000383932 102 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 RNU6-939P-201ENST00000384634 107 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 MIR150-201ENST00000385048 84 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 AL451046.2-201ENST00000403074 277 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 MIR1289-2-201ENST00000408360 111 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 RNA5SP511-201ENST00000410487 115 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGB1P09429 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 ELOCP24-201ENST00000456370 334 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 SNORA70.12-201ENST00000516084 153 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGB1P09429 AC005730.3-201ENST00000583067 366 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 AC011476.5-201ENST00000615594 130 ntBASIC1.89□□□□□ -2.11
HMGB1P09429 RNU6-324P-201ENST00000363957 106 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 SNORD115-30-201ENST00000364117 82 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 Y_RNA.387-201ENST00000383918 102 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 MIR504-201ENST00000385065 83 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 SNORD78.2-201ENST00000391076 69 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 RNU5A-5P-201ENST00000411054 116 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGB1P09429 AC096644.2-201ENST00000429278 159 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 RBMX2P4-201ENST00000441256 376 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGB1P09429 RNU2-12P-201ENST00000517216 168 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.88□□□□□ -2.11
HMGB1P09429 AC005176.2-201ENST00000596933 147 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 AC025253.1-201ENST00000613623 543 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 U2.1-201ENST00000618978 145 ntBASIC1.88□□□□□ -2.11
HMGB1P09429 MIR618-201ENST00000385287 98 ntBASIC1.87□□□□□ -2.11
HMGB1P09429 AC104332.1-201ENST00000440471 797 ntBASIC1.87□□□□□ -2.11
HMGB1P09429 RPEP5-201ENST00000441137 268 ntBASIC1.87□□□□□ -2.11
HMGB1P09429 RNU6-1337P-201ENST00000516525 95 ntBASIC1.87□□□□□ -2.11
HMGB1P09429 AC090049.2-201ENST00000550377 109 ntBASIC1.87□□□□□ -2.11
HMGB1P09429 BX284668.6-201ENST00000606899 438 ntBASIC1.87□□□□□ -2.11
HMGB1P09429 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
HMGB1P09429 RNU4-13P-201ENST00000364019 141 ntBASIC1.86□□□□□ -2.11
HMGB1P09429 RNU4-41P-201ENST00000364426 143 ntBASIC1.86□□□□□ -2.11
HMGB1P09429 SNORA25-201ENST00000384384 134 ntBASIC1.86□□□□□ -2.11
HMGB1P09429 RNY3P4-201ENST00000384428 101 ntBASIC1.86□□□□□ -2.11
HMGB1P09429 MIR1261-201ENST00000408659 82 ntBASIC1.86□□□□□ -2.11
HMGB1P09429 AL354751.2-201ENST00000415471 210 ntBASIC1.86□□□□□ -2.11
HMGB1P09429 CYCSP49-201ENST00000420810 319 ntBASIC1.86□□□□□ -2.11
HMGB1P09429 RNU6-917P-201ENST00000516294 104 ntBASIC1.86□□□□□ -2.11
HMGB1P09429 AL022345.2-201ENST00000606307 135 ntBASIC1.86□□□□□ -2.11
HMGB1P09429 MIR1302-1-201ENST00000637932 143 ntBASIC1.86□□□□□ -2.11
HMGB1P09429 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMGB1P09429 SNORD114-7-201ENST00000362520 77 ntBASIC1.85□□□□□ -2.11
HMGB1P09429 Y_RNA.101-201ENST00000363154 102 ntBASIC1.85□□□□□ -2.11
HMGB1P09429 SNORD68-201ENST00000363214 84 ntBASIC1.85□□□□□ -2.11
HMGB1P09429 RNU6-626P-201ENST00000363354 107 ntBASIC1.85□□□□□ -2.11
HMGB1P09429 RNU6-20P-201ENST00000384106 107 ntBASIC1.85□□□□□ -2.11
HMGB1P09429 AL031003.1-201ENST00000404229 172 ntBASIC1.85□□□□□ -2.11
HMGB1P09429 AC099799.1-201ENST00000439809 192 ntBASIC1.85□□□□□ -2.11
HMGB1P09429 SNORA31.2-201ENST00000516019 134 ntBASIC1.85□□□□□ -2.11
HMGB1P09429 RNU6-1116P-201ENST00000517269 99 ntBASIC1.85□□□□□ -2.11
HMGB1P09429 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms