Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MIR125B2-201ENST00000385128 89 ntBASIC-1.32□□□□□ -2.62
HMGN1P05114 AC116353.3-201ENST00000511215 249 ntBASIC-1.32□□□□□ -2.62
HMGN1P05114 SNORD92-201ENST00000585078 85 ntBASIC-1.32□□□□□ -2.62
HMGN1P05114 AL442067.1-201ENST00000613261 223 ntBASIC-1.32□□□□□ -2.62
HMGN1P05114 uc_338.22-201ENST00000622722 187 ntBASIC-1.32□□□□□ -2.62
HMGN1P05114 AC106754.1-201ENST00000562632 1513 ntBASIC-1.33□□□□□ -2.62
HMGN1P05114 MT-TQ-201ENST00000387372 72 ntBASIC-1.33□□□□□ -2.62
HMGN1P05114 SNORA26.5-201ENST00000391215 123 ntBASIC-1.33□□□□□ -2.62
HMGN1P05114 AL390729.2-201ENST00000416137 156 ntBASIC-1.33□□□□□ -2.62
HMGN1P05114 SUMO1P3-201ENST00000439961 304 ntBASIC-1.33□□□□□ -2.62
HMGN1P05114 RNU7-156P-201ENST00000517214 74 ntBASIC-1.33□□□□□ -2.62
HMGN1P05114 RNU2-12P-201ENST00000517216 168 ntBASIC-1.33□□□□□ -2.62
HMGN1P05114 AC022616.3-201ENST00000523940 148 ntBASIC-1.33□□□□□ -2.62
HMGN1P05114 AC087683.1-201ENST00000591187 441 ntBASIC-1.33□□□□□ -2.62
HMGN1P05114 AC091304.10-201ENST00000641554 121 ntBASIC-1.33□□□□□ -2.62
HMGN1P05114 RNU6-873P-201ENST00000363833 107 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 SNORD115-7-201ENST00000365306 82 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 RNU6-245P-201ENST00000384020 107 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 SNORA3B-201ENST00000391305 131 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 MTCO1P5-201ENST00000433573 344 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.34□□□□□ -2.62
HMGN1P05114 SNORA18.4-201ENST00000516440 124 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 RNU6-504P-201ENST00000516568 104 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 MTND1P5-201ENST00000517906 940 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 AC006386.1-201ENST00000619436 415 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 AC022418.1-201ENST00000624118 445 ntBASIC-1.34□□□□□ -2.62
HMGN1P05114 RNU6-227P-201ENST00000362865 103 ntBASIC-1.35□□□□□ -2.63
HMGN1P05114 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.35□□□□□ -2.63
HMGN1P05114 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.35□□□□□ -2.63
HMGN1P05114 RNU6-550P-201ENST00000391057 101 ntBASIC-1.35□□□□□ -2.63
HMGN1P05114 ELOCP4-201ENST00000420090 333 ntBASIC-1.35□□□□□ -2.63
HMGN1P05114 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
HMGN1P05114 AC010587.1-201ENST00000505809 469 ntBASIC-1.35□□□□□ -2.63
HMGN1P05114 AC116562.3-201ENST00000506136 177 ntBASIC-1.35□□□□□ -2.63
HMGN1P05114 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.35□□□□□ -2.63
HMGN1P05114 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.35□□□□□ -2.63
HMGN1P05114 AF250324.2-201ENST00000608299 610 ntBASIC-1.35□□□□□ -2.63
HMGN1P05114 AL139418.1-201ENST00000613613 177 ntBASIC-1.35□□□□□ -2.63
HMGN1P05114 MIR6514-201ENST00000622549 70 ntBASIC-1.35□□□□□ -2.63
HMGN1P05114 MTND5P32-201ENST00000560711 1802 ntBASIC-1.36□□□□□ -2.63
HMGN1P05114 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.36□□□□□ -2.63
HMGN1P05114 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.36□□□□□ -2.63
HMGN1P05114 BTF3P11-201ENST00000426582 477 ntBASIC-1.36□□□□□ -2.63
HMGN1P05114 MTCO2P6-201ENST00000463134 685 ntBASIC-1.36□□□□□ -2.63
HMGN1P05114 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-1.36□□□□□ -2.63
HMGN1P05114 NAMPTP3-201ENST00000569273 224 ntBASIC-1.36□□□□□ -2.63
HMGN1P05114 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.37□□□□□ -2.63
HMGN1P05114 U8.5-201ENST00000364528 136 ntBASIC-1.37□□□□□ -2.63
HMGN1P05114 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.37□□□□□ -2.63
HMGN1P05114 MIR7-2-201ENST00000384970 110 ntBASIC-1.37□□□□□ -2.63
HMGN1P05114 AL365184.2-201ENST00000431139 435 ntBASIC-1.37□□□□□ -2.63
HMGN1P05114 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.37□□□□□ -2.63
HMGN1P05114 RNU7-62P-201ENST00000458856 62 ntBASIC-1.37□□□□□ -2.63
HMGN1P05114 RNU6-612P-201ENST00000516909 102 ntBASIC-1.37□□□□□ -2.63
HMGN1P05114 SNORA25.17-201ENST00000517184 124 ntBASIC-1.37□□□□□ -2.63
HMGN1P05114 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.37□□□□□ -2.63
HMGN1P05114 AC068880.4-201ENST00000623082 495 ntBASIC-1.37□□□□□ -2.63
HMGN1P05114 U6.114-201ENST00000636407 96 ntBASIC-1.37□□□□□ -2.63
HMGN1P05114 MIR563-201ENST00000385080 79 ntBASIC-1.38□□□□□ -2.63
HMGN1P05114 AC069113.1-201ENST00000517763 267 ntBASIC-1.38□□□□□ -2.63
HMGN1P05114 CR383656.4-201ENST00000546909 122 ntBASIC-1.38□□□□□ -2.63
HMGN1P05114 AC108676.2-201ENST00000605225 163 ntBASIC-1.38□□□□□ -2.63
HMGN1P05114 AL590491.3-201ENST00000610731 82 ntBASIC-1.38□□□□□ -2.63
HMGN1P05114 MTND4P12-201ENST00000498999 1377 ntBASIC-1.38□□□□□ -2.63
HMGN1P05114 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.39□□□□□ -2.63
HMGN1P05114 RNU6-811P-201ENST00000384069 107 ntBASIC-1.39□□□□□ -2.63
HMGN1P05114 RNY1P7-201ENST00000384743 110 ntBASIC-1.39□□□□□ -2.63
HMGN1P05114 MIR1257-201ENST00000408490 117 ntBASIC-1.39□□□□□ -2.63
HMGN1P05114 MTCO2P3-201ENST00000442543 421 ntBASIC-1.39□□□□□ -2.63
HMGN1P05114 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.39□□□□□ -2.63
HMGN1P05114 RNU6-758P-201ENST00000516292 89 ntBASIC-1.39□□□□□ -2.63
HMGN1P05114 MIR548AR-201ENST00000582191 57 ntBASIC-1.39□□□□□ -2.63
HMGN1P05114 AC002044.1-201ENST00000606707 158 ntBASIC-1.39□□□□□ -2.63
HMGN1P05114 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.39□□□□□ -2.63
HMGN1P05114 MIR148A-201ENST00000362215 68 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 RNU4-1-201ENST00000363925 141 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
HMGN1P05114 ELOCP21-201ENST00000412558 336 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 MTCO1P20-201ENST00000425366 358 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 AC092447.3-201ENST00000426027 686 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.4□□□□□ -2.63
HMGN1P05114 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.4□□□□□ -2.63
HMGN1P05114 AC074198.2-201ENST00000508153 258 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 AC046134.1-201ENST00000514454 666 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.4□□□□□ -2.63
HMGN1P05114 RNA5SP54-201ENST00000516951 92 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-1.4□□□□□ -2.63
HMGN1P05114 BNIP3P39-201ENST00000601077 554 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 uc_338.4-201ENST00000616635 176 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 AC068137.4-201ENST00000638485 296 ntBASIC-1.4□□□□□ -2.63
HMGN1P05114 MIR501-201ENST00000390204 84 ntBASIC-1.41□□□□□ -2.64
HMGN1P05114 Z95118.1-201ENST00000421372 247 ntBASIC-1.41□□□□□ -2.64
HMGN1P05114 MTND4P18-201ENST00000447010 465 ntBASIC-1.41□□□□□ -2.64
HMGN1P05114 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.41□□□□□ -2.64
HMGN1P05114 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.41□□□□□ -2.64
HMGN1P05114 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.41□□□□□ -2.64
HMGN1P05114 AC018448.1-201ENST00000552843 316 ntBASIC-1.41□□□□□ -2.64
HMGN1P05114 MIR4752-201ENST00000579672 72 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms