Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RNA5SP20-201ENST00000515976 84 ntBASIC1.74□□□□□ -2.13
MBD4O95243 RNU6-970P-201ENST00000516312 107 ntBASIC1.74□□□□□ -2.13
MBD4O95243 AP002001.1-203ENST00000534002 267 ntBASIC1.74□□□□□ -2.13
MBD4O95243 AC005828.6-201ENST00000606610 232 ntBASIC1.74□□□□□ -2.13
MBD4O95243 AC021506.2-201ENST00000612354 169 ntBASIC1.74□□□□□ -2.13
MBD4O95243 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.74□□□□□ -2.13
MBD4O95243 U6.115-201ENST00000636045 103 ntBASIC1.74□□□□□ -2.13
MBD4O95243 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MBD4O95243 SNORD114-7-201ENST00000362520 77 ntBASIC1.73□□□□□ -2.13
MBD4O95243 Y_RNA.263-201ENST00000364659 114 ntBASIC1.73□□□□□ -2.13
MBD4O95243 MIR513A1-201ENST00000385138 129 ntBASIC1.73□□□□□ -2.13
MBD4O95243 MIR559-201ENST00000385188 96 ntBASIC1.73□□□□□ -2.13
MBD4O95243 MIR873-201ENST00000401120 77 ntBASIC1.73□□□□□ -2.13
MBD4O95243 AL034345.1-201ENST00000407768 123 ntBASIC1.73□□□□□ -2.13
MBD4O95243 RNU6-408P-201ENST00000515910 100 ntBASIC1.73□□□□□ -2.13
MBD4O95243 RNU6-1278P-201ENST00000516130 107 ntBASIC1.73□□□□□ -2.13
MBD4O95243 Y_RNA.675-201ENST00000516389 149 ntBASIC1.73□□□□□ -2.13
MBD4O95243 Y_RNA.702-201ENST00000516843 96 ntBASIC1.73□□□□□ -2.13
MBD4O95243 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.73□□□□□ -2.13
MBD4O95243 AL355375.2-201ENST00000574825 175 ntBASIC1.73□□□□□ -2.13
MBD4O95243 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
MBD4O95243 AC040896.1-201ENST00000613819 479 ntBASIC1.73□□□□□ -2.13
MBD4O95243 U2.1-201ENST00000618978 145 ntBASIC1.73□□□□□ -2.13
MBD4O95243 MIR6079-201ENST00000635807 62 ntBASIC1.73□□□□□ -2.13
MBD4O95243 RNU6-454P-201ENST00000364292 107 ntBASIC1.72□□□□□ -2.13
MBD4O95243 RNU6-1065P-201ENST00000384513 106 ntBASIC1.72□□□□□ -2.13
MBD4O95243 SNORD78.2-201ENST00000391076 69 ntBASIC1.72□□□□□ -2.13
MBD4O95243 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
MBD4O95243 RNU7-169P-201ENST00000459456 61 ntBASIC1.72□□□□□ -2.13
MBD4O95243 AC023790.1-201ENST00000482174 347 ntBASIC1.72□□□□□ -2.13
MBD4O95243 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.72□□□□□ -2.13
MBD4O95243 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.72□□□□□ -2.13
MBD4O95243 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.72□□□□□ -2.13
MBD4O95243 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.72□□□□□ -2.13
MBD4O95243 AL161670.1-201ENST00000554348 137 ntBASIC1.72□□□□□ -2.13
MBD4O95243 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.72□□□□□ -2.13
MBD4O95243 AL390123.1-201ENST00000603216 237 ntBASIC1.72□□□□□ -2.13
MBD4O95243 SNORA28-201ENST00000606769 126 ntBASIC1.72□□□□□ -2.13
MBD4O95243 AL121890.5-201ENST00000620848 304 ntBASIC1.72□□□□□ -2.13
MBD4O95243 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.72□□□□□ -2.13
MBD4O95243 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.71□□□□□ -2.13
MBD4O95243 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
MBD4O95243 ZNF209P-201ENST00000593450 2304 ntBASIC1.71□□□□□ -2.14
MBD4O95243 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.71□□□□□ -2.14
MBD4O95243 MRPS18CP6-201ENST00000423587 223 ntBASIC1.71□□□□□ -2.14
MBD4O95243 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.71□□□□□ -2.14
MBD4O95243 RNU7-152P-201ENST00000458982 64 ntBASIC1.71□□□□□ -2.14
MBD4O95243 Y_RNA.632-201ENST00000459189 102 ntBASIC1.71□□□□□ -2.14
MBD4O95243 snoU13.31-201ENST00000607291 104 ntBASIC1.71□□□□□ -2.14
MBD4O95243 AC084781.2-201ENST00000615568 161 ntBASIC1.71□□□□□ -2.14
MBD4O95243 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.7□□□□□ -2.14
MBD4O95243 Y_RNA.243-201ENST00000364481 109 ntBASIC1.7□□□□□ -2.14
MBD4O95243 RNU6-376P-201ENST00000384731 106 ntBASIC1.7□□□□□ -2.14
MBD4O95243 AC236972.2-201ENST00000434979 310 ntBASIC1.7□□□□□ -2.14
MBD4O95243 AL137792.2-201ENST00000443484 235 ntBASIC1.7□□□□□ -2.14
MBD4O95243 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.7□□□□□ -2.14
MBD4O95243 SNORD19B-201ENST00000459623 84 ntBASIC1.7□□□□□ -2.14
MBD4O95243 RNU1-92P-201ENST00000517017 135 ntBASIC1.7□□□□□ -2.14
MBD4O95243 AC019176.1-201ENST00000518519 225 ntBASIC1.7□□□□□ -2.14
MBD4O95243 AL513423.1-201ENST00000621695 132 ntBASIC1.7□□□□□ -2.14
MBD4O95243 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
MBD4O95243 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
MBD4O95243 Y_RNA.187-201ENST00000363918 113 ntBASIC1.69□□□□□ -2.14
MBD4O95243 Y_RNA.338-201ENST00000365320 114 ntBASIC1.69□□□□□ -2.14
MBD4O95243 RNA5SP259-201ENST00000365541 109 ntBASIC1.69□□□□□ -2.14
MBD4O95243 Y_RNA.428-201ENST00000384078 102 ntBASIC1.69□□□□□ -2.14
MBD4O95243 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.69□□□□□ -2.14
MBD4O95243 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.69□□□□□ -2.14
MBD4O95243 RNU6-699P-201ENST00000517081 110 ntBASIC1.69□□□□□ -2.14
MBD4O95243 AC023442.1-201ENST00000531247 422 ntBASIC1.69□□□□□ -2.14
MBD4O95243 MIR4498-201ENST00000577599 66 ntBASIC1.69□□□□□ -2.14
MBD4O95243 AC006380.1-201ENST00000603598 186 ntBASIC1.69□□□□□ -2.14
MBD4O95243 AP001485.1-201ENST00000604799 199 ntBASIC1.69□□□□□ -2.14
MBD4O95243 AC127459.3-201ENST00000624328 466 ntBASIC1.69□□□□□ -2.14
MBD4O95243 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
MBD4O95243 AP000648.3-201ENST00000623539 4507 ntBASIC1.68□□□□□ -2.14
MBD4O95243 RNU6-961P-201ENST00000363893 105 ntBASIC1.68□□□□□ -2.14
MBD4O95243 RNY3P11-201ENST00000364153 102 ntBASIC1.68□□□□□ -2.14
MBD4O95243 Y_RNA.356-201ENST00000365475 113 ntBASIC1.68□□□□□ -2.14
MBD4O95243 RNU6-926P-201ENST00000384075 107 ntBASIC1.68□□□□□ -2.14
MBD4O95243 Y_RNA.529-201ENST00000384586 119 ntBASIC1.68□□□□□ -2.14
MBD4O95243 RN7SKP51-201ENST00000410781 304 ntBASIC1.68□□□□□ -2.14
MBD4O95243 SNX2P2-201ENST00000424553 323 ntBASIC1.68□□□□□ -2.14
MBD4O95243 RPS27P16-201ENST00000425758 201 ntBASIC1.68□□□□□ -2.14
MBD4O95243 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
MBD4O95243 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.68□□□□□ -2.14
MBD4O95243 SNRPGP13-201ENST00000442212 177 ntBASIC1.68□□□□□ -2.14
MBD4O95243 SNORA70.12-201ENST00000516084 153 ntBASIC1.68□□□□□ -2.14
MBD4O95243 RNU6-341P-201ENST00000516973 96 ntBASIC1.68□□□□□ -2.14
MBD4O95243 MIR4421-201ENST00000578133 69 ntBASIC1.68□□□□□ -2.14
MBD4O95243 VN1R91P-201ENST00000594377 169 ntBASIC1.68□□□□□ -2.14
MBD4O95243 AL021879.1-201ENST00000611756 288 ntBASIC1.68□□□□□ -2.14
MBD4O95243 AC004467.1-201ENST00000615678 330 ntBASIC1.68□□□□□ -2.14
MBD4O95243 AC073349.3-201ENST00000617616 186 ntBASIC1.68□□□□□ -2.14
MBD4O95243 Y_RNA.27-201ENST00000362540 103 ntBASIC1.67□□□□□ -2.14
MBD4O95243 U8.1-201ENST00000362843 134 ntBASIC1.67□□□□□ -2.14
MBD4O95243 Y_RNA.146-201ENST00000363549 102 ntBASIC1.67□□□□□ -2.14
MBD4O95243 Y_RNA.463-201ENST00000384271 102 ntBASIC1.67□□□□□ -2.14
MBD4O95243 STAG3L5P-204ENST00000443759 179 ntBASIC1.67□□□□□ -2.14
MBD4O95243 AC009474.2-201ENST00000451383 136 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms