Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 MIR515-1-201ENST00000384884 83 ntBASIC2.6□□□□□ -1.99
CLSTN1O94985 RNA5SP109-201ENST00000391010 116 ntBASIC2.6□□□□□ -1.99
CLSTN1O94985 Y_RNA.581-201ENST00000391017 97 ntBASIC2.6□□□□□ -1.99
CLSTN1O94985 RNU2-7P-201ENST00000410794 178 ntBASIC2.6□□□□□ -1.99
CLSTN1O94985 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.6□□□□□ -1.99
CLSTN1O94985 AL358176.2-201ENST00000425769 204 ntBASIC2.6□□□□□ -1.99
CLSTN1O94985 AL606517.2-201ENST00000442855 241 ntBASIC2.6□□□□□ -1.99
CLSTN1O94985 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.6□□□□□ -1.99
CLSTN1O94985 SNORA70.12-201ENST00000516084 153 ntBASIC2.6□□□□□ -1.99
CLSTN1O94985 SNORA31.17-201ENST00000516953 127 ntBASIC2.6□□□□□ -1.99
CLSTN1O94985 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.6□□□□□ -1.99
CLSTN1O94985 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.6□□□□□ -1.99
CLSTN1O94985 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.6□□□□□ -1.99
CLSTN1O94985 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.6□□□□□ -1.99
CLSTN1O94985 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.6□□□□□ -1.99
CLSTN1O94985 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CLSTN1O94985 RNU4-90P-201ENST00000362773 141 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 Y_RNA.541-201ENST00000384640 113 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 RNU6-1105P-201ENST00000384774 107 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 MIR518C-201ENST00000384822 101 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 RPS15AP28-201ENST00000435088 386 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 AC018634.1-201ENST00000437554 401 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 SNORA59A-201ENST00000459326 152 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 RPL23AP63-201ENST00000498752 471 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 AC024995.1-201ENST00000523014 93 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 MIR3162-201ENST00000581818 82 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 MIR4435-1-201ENST00000582552 80 ntBASIC2.59□□□□□ -1.99
CLSTN1O94985 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
CLSTN1O94985 Y_RNA.16-201ENST00000362421 102 ntBASIC2.58□□□□□ -2
CLSTN1O94985 SNORD116-13-201ENST00000384408 92 ntBASIC2.58□□□□□ -2
CLSTN1O94985 AL359511.1-201ENST00000402970 211 ntBASIC2.58□□□□□ -2
CLSTN1O94985 RNA5SP508-201ENST00000411327 119 ntBASIC2.58□□□□□ -2
CLSTN1O94985 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.58□□□□□ -2
CLSTN1O94985 AC026436.1-201ENST00000510537 270 ntBASIC2.58□□□□□ -2
CLSTN1O94985 RNA5SP437-201ENST00000517249 129 ntBASIC2.58□□□□□ -2
CLSTN1O94985 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.58□□□□□ -2
CLSTN1O94985 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.58□□□□□ -2
CLSTN1O94985 MIR449A-201ENST00000362113 91 ntBASIC2.57□□□□□ -2
CLSTN1O94985 SNORD114-7-201ENST00000362520 77 ntBASIC2.57□□□□□ -2
CLSTN1O94985 Y_RNA.47-201ENST00000362697 108 ntBASIC2.57□□□□□ -2
CLSTN1O94985 Y_RNA.84-201ENST00000363011 104 ntBASIC2.57□□□□□ -2
CLSTN1O94985 RNU4-80P-201ENST00000363200 141 ntBASIC2.57□□□□□ -2
CLSTN1O94985 RNU6-117P-201ENST00000365415 107 ntBASIC2.57□□□□□ -2
CLSTN1O94985 RNU6-376P-201ENST00000384731 106 ntBASIC2.57□□□□□ -2
CLSTN1O94985 Y_RNA.569-201ENST00000384749 103 ntBASIC2.57□□□□□ -2
CLSTN1O94985 Y_RNA.574-201ENST00000384766 95 ntBASIC2.57□□□□□ -2
CLSTN1O94985 MIR520A-201ENST00000384862 85 ntBASIC2.57□□□□□ -2
CLSTN1O94985 RNA5SP511-201ENST00000410487 115 ntBASIC2.57□□□□□ -2
CLSTN1O94985 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.57□□□□□ -2
CLSTN1O94985 AC008413.1-201ENST00000511864 177 ntBASIC2.57□□□□□ -2
CLSTN1O94985 PRR13P7-201ENST00000605538 430 ntBASIC2.57□□□□□ -2
CLSTN1O94985 AC067747.1-201ENST00000608026 250 ntBASIC2.57□□□□□ -2
CLSTN1O94985 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.57□□□□□ -2
CLSTN1O94985 AC016717.2-201ENST00000609089 5141 ntBASIC2.56□□□□□ -2
CLSTN1O94985 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CLSTN1O94985 Y_RNA.176-201ENST00000363815 109 ntBASIC2.56□□□□□ -2
CLSTN1O94985 SNORA4.2-201ENST00000365313 147 ntBASIC2.56□□□□□ -2
CLSTN1O94985 Y_RNA.376-201ENST00000365638 108 ntBASIC2.56□□□□□ -2
CLSTN1O94985 RNU6-713P-201ENST00000384761 107 ntBASIC2.56□□□□□ -2
CLSTN1O94985 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.56□□□□□ -2
CLSTN1O94985 RPL21P9-201ENST00000556149 474 ntBASIC2.56□□□□□ -2
CLSTN1O94985 MIR4713-201ENST00000582691 75 ntBASIC2.56□□□□□ -2
CLSTN1O94985 MIR4672-201ENST00000583126 81 ntBASIC2.56□□□□□ -2
CLSTN1O94985 AC022217.4-201ENST00000604389 163 ntBASIC2.56□□□□□ -2
CLSTN1O94985 AC010900.2-201ENST00000604508 210 ntBASIC2.56□□□□□ -2
CLSTN1O94985 AC005336.3-201ENST00000623833 2679 ntBASIC2.56□□□□□ -2
CLSTN1O94985 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.56□□□□□ -2
CLSTN1O94985 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CLSTN1O94985 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLSTN1O94985 SNORA63D-201ENST00000364359 132 ntBASIC2.55□□□□□ -2
CLSTN1O94985 Y_RNA.418-201ENST00000384029 102 ntBASIC2.55□□□□□ -2
CLSTN1O94985 RNU6-855P-201ENST00000410395 104 ntBASIC2.55□□□□□ -2
CLSTN1O94985 AC091021.1-201ENST00000468051 388 ntBASIC2.55□□□□□ -2
CLSTN1O94985 RPS26P45-201ENST00000471748 340 ntBASIC2.55□□□□□ -2
CLSTN1O94985 RNU6-1278P-201ENST00000516130 107 ntBASIC2.55□□□□□ -2
CLSTN1O94985 MIR1291-201ENST00000627649 87 ntBASIC2.55□□□□□ -2
CLSTN1O94985 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.55□□□□□ -2
CLSTN1O94985 CTSLP2-204ENST00000629029 392 ntBASIC2.55□□□□□ -2
CLSTN1O94985 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLSTN1O94985 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLSTN1O94985 MIR21-201ENST00000362134 72 ntBASIC2.54□□□□□ -2
CLSTN1O94985 RNU4-82P-201ENST00000362443 140 ntBASIC2.54□□□□□ -2
CLSTN1O94985 Y_RNA.133-201ENST00000363428 110 ntBASIC2.54□□□□□ -2
CLSTN1O94985 RNU6-290P-201ENST00000365212 101 ntBASIC2.54□□□□□ -2
CLSTN1O94985 AC009310.1-201ENST00000414414 451 ntBASIC2.54□□□□□ -2
CLSTN1O94985 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.54□□□□□ -2
CLSTN1O94985 HSPE1P9-201ENST00000440046 311 ntBASIC2.54□□□□□ -2
CLSTN1O94985 RPS27P1-201ENST00000450552 247 ntBASIC2.54□□□□□ -2
CLSTN1O94985 HSPE1P13-201ENST00000451143 297 ntBASIC2.54□□□□□ -2
CLSTN1O94985 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.54□□□□□ -2
CLSTN1O94985 HMGN1P10-201ENST00000474557 553 ntBASIC2.54□□□□□ -2
CLSTN1O94985 RPS29P21-201ENST00000496272 170 ntBASIC2.54□□□□□ -2
CLSTN1O94985 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.54□□□□□ -2
CLSTN1O94985 SCARNA24.2-201ENST00000516968 130 ntBASIC2.54□□□□□ -2
CLSTN1O94985 AC046143.2-201ENST00000609789 160 ntBASIC2.54□□□□□ -2
CLSTN1O94985 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.54□□□□□ -2
CLSTN1O94985 MIR6873-201ENST00000622788 63 ntBASIC2.54□□□□□ -2
CLSTN1O94985 MIR6079-201ENST00000635807 62 ntBASIC2.54□□□□□ -2
CLSTN1O94985 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CLSTN1O94985 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms