Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.28□□□□□ -2.45
PCF11O94913 AC097462.1-201ENST00000514125 324 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 RNU7-41P-201ENST00000515917 61 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 SNORA25.14-201ENST00000516481 132 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 HIF1AP1-201ENST00000553642 175 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 MTND4P33-201ENST00000556706 766 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 MIR4703-201ENST00000577728 79 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 RNU2-29P-201ENST00000410423 189 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 MTND3P9-201ENST00000429526 346 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.28□□□□□ -2.45
PCF11O94913 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.28□□□□□ -2.45
PCF11O94913 AC091021.1-201ENST00000468051 388 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 RPS3AP17-201ENST00000472594 777 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 RPL23AP75-201ENST00000491601 451 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 SNORD27.1-201ENST00000516319 72 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 RNU6-320P-201ENST00000516511 106 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 MTND1P5-201ENST00000517906 940 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.28□□□□□ -2.45
PCF11O94913 RMST_3.1-201ENST00000611651 109 ntBASIC-0.28□□□□□ -2.45
PCF11O94913 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.29□□□□□ -2.46
PCF11O94913 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.29□□□□□ -2.46
PCF11O94913 SNORD83.1-201ENST00000411362 77 ntBASIC-0.29□□□□□ -2.46
PCF11O94913 AL590632.1-201ENST00000424289 371 ntBASIC-0.29□□□□□ -2.46
PCF11O94913 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.29□□□□□ -2.46
PCF11O94913 MTND1P4-201ENST00000435196 415 ntBASIC-0.29□□□□□ -2.46
PCF11O94913 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.29□□□□□ -2.46
PCF11O94913 AC007684.1-201ENST00000609671 477 ntBASIC-0.29□□□□□ -2.46
PCF11O94913 MIR8064-201ENST00000612863 90 ntBASIC-0.29□□□□□ -2.46
PCF11O94913 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.3□□□□□ -2.46
PCF11O94913 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.3□□□□□ -2.46
PCF11O94913 SNORD115-8-201ENST00000363856 82 ntBASIC-0.3□□□□□ -2.46
PCF11O94913 SNORD115-38-201ENST00000365037 82 ntBASIC-0.3□□□□□ -2.46
PCF11O94913 RNU6-396P-201ENST00000365369 105 ntBASIC-0.3□□□□□ -2.46
PCF11O94913 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.3□□□□□ -2.46
PCF11O94913 snoU13.21-201ENST00000459368 105 ntBASIC-0.3□□□□□ -2.46
PCF11O94913 AC005178.1-201ENST00000508392 440 ntBASIC-0.3□□□□□ -2.46
PCF11O94913 RNA5SP268-201ENST00000516828 124 ntBASIC-0.3□□□□□ -2.46
PCF11O94913 RBM11P1-201ENST00000604951 799 ntBASIC-0.3□□□□□ -2.46
PCF11O94913 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
PCF11O94913 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 RNU6-934P-201ENST00000365154 107 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 SNORD14.1-201ENST00000365609 90 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 MIR1-2-201ENST00000384961 85 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 RNU6-613P-201ENST00000410412 108 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 RNU2-59P-201ENST00000410482 191 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 AC243428.1-201ENST00000421099 264 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 MIR4509-3-201ENST00000578671 94 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 MIR4509-2-201ENST00000583920 94 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 AC120024.3-201ENST00000603167 156 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 AC018714.1-201ENST00000605028 208 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 MIR4509-1-201ENST00000618224 94 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 AL008636.1-201ENST00000625038 1018 ntBASIC-0.31□□□□□ -2.46
PCF11O94913 MIR15B-201ENST00000385045 98 ntBASIC-0.32□□□□□ -2.46
PCF11O94913 MTCYBP4-201ENST00000401524 249 ntBASIC-0.32□□□□□ -2.46
PCF11O94913 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.32□□□□□ -2.46
PCF11O94913 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.32□□□□□ -2.46
PCF11O94913 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.32□□□□□ -2.46
PCF11O94913 MTND4P18-201ENST00000447010 465 ntBASIC-0.32□□□□□ -2.46
PCF11O94913 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
PCF11O94913 MIR3684-201ENST00000579779 74 ntBASIC-0.32□□□□□ -2.46
PCF11O94913 Z84480.1-201ENST00000605131 311 ntBASIC-0.32□□□□□ -2.46
PCF11O94913 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.32□□□□□ -2.46
PCF11O94913 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.32□□□□□ -2.46
PCF11O94913 SNORD87-201ENST00000364849 89 ntBASIC-0.32□□□□□ -2.46
PCF11O94913 RNA5SP128-201ENST00000365305 116 ntBASIC-0.32□□□□□ -2.46
PCF11O94913 MIR1207-201ENST00000408249 87 ntBASIC-0.32□□□□□ -2.46
PCF11O94913 MIR2115-201ENST00000516657 100 ntBASIC-0.32□□□□□ -2.46
PCF11O94913 MTND2P38-201ENST00000522536 667 ntBASIC-0.32□□□□□ -2.46
PCF11O94913 MTND5P32-201ENST00000560711 1802 ntBASIC-0.33□□□□□ -2.46
PCF11O94913 RNU6-280P-201ENST00000364145 104 ntBASIC-0.33□□□□□ -2.46
PCF11O94913 RNU6-376P-201ENST00000384731 106 ntBASIC-0.33□□□□□ -2.46
PCF11O94913 SNORA32.3-201ENST00000384772 121 ntBASIC-0.33□□□□□ -2.46
PCF11O94913 RPS29P15-201ENST00000458329 171 ntBASIC-0.33□□□□□ -2.46
PCF11O94913 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.33□□□□□ -2.46
PCF11O94913 AC006566.1-201ENST00000608943 513 ntBASIC-0.33□□□□□ -2.46
PCF11O94913 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.33□□□□□ -2.46
PCF11O94913 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.33□□□□□ -2.46
PCF11O94913 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.34□□□□□ -2.46
PCF11O94913 RNU6-784P-201ENST00000384330 106 ntBASIC-0.34□□□□□ -2.46
PCF11O94913 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.34□□□□□ -2.46
PCF11O94913 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.34□□□□□ -2.46
PCF11O94913 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.34□□□□□ -2.46
PCF11O94913 PIGPP3-201ENST00000425307 415 ntBASIC-0.34□□□□□ -2.46
PCF11O94913 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.34□□□□□ -2.46
PCF11O94913 AF186996.7-201ENST00000492781 209 ntBASIC-0.34□□□□□ -2.46
PCF11O94913 RPL39P5-202ENST00000512505 151 ntBASIC-0.34□□□□□ -2.46
PCF11O94913 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.34□□□□□ -2.46
PCF11O94913 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.34□□□□□ -2.46
PCF11O94913 IGKV1-22-201ENST00000524313 326 ntBASIC-0.34□□□□□ -2.46
PCF11O94913 AC099654.13-201ENST00000639774 207 ntBASIC-0.34□□□□□ -2.46
PCF11O94913 SNORD114-5-201ENST00000362928 70 ntBASIC-0.35□□□□□ -2.47
PCF11O94913 AC117470.1-201ENST00000381974 330 ntBASIC-0.35□□□□□ -2.47
PCF11O94913 AL049545.1-201ENST00000401856 572 ntBASIC-0.35□□□□□ -2.47
PCF11O94913 RNU4-63P-201ENST00000411313 118 ntBASIC-0.35□□□□□ -2.47
PCF11O94913 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.35□□□□□ -2.47
PCF11O94913 AC114811.1-201ENST00000507207 168 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms