Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNU6-455P-201ENST00000384681 107 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 TPMTP2-201ENST00000414372 726 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 MTND1P4-201ENST00000435196 415 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 RPL22P17-201ENST00000438729 315 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC097484.2-201ENST00000509147 251 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC022483.1-201ENST00000514020 567 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 RNU6-168P-201ENST00000516189 101 ntBASIC-0.58□□□□□ -2.5
USH2AO75445 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.58□□□□□ -2.5
USH2AO75445 RNA5SP26-201ENST00000362406 119 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.59□□□□□ -2.5
USH2AO75445 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.59□□□□□ -2.5
USH2AO75445 SNORD114-13-201ENST00000364377 74 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 MIR10A-201ENST00000385043 110 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 RNA5SP467-201ENST00000391274 118 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 RNU2-33P-201ENST00000410344 192 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 MTCYBP8-201ENST00000422855 651 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 FGF7P6-202ENST00000451282 293 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 AC013828.1-201ENST00000481845 158 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.59□□□□□ -2.5
USH2AO75445 AP000568.1-201ENST00000282964 442 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 RNU6-712P-201ENST00000410558 100 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 AC074085.1-201ENST00000413598 418 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 AL035461.1-201ENST00000421490 332 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 ELOCP20-201ENST00000422460 345 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC-0.59□□□□□ -2.5
USH2AO75445 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.59□□□□□ -2.5
USH2AO75445 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 DEFB108D-201ENST00000527787 222 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 AC087894.1-201ENST00000538359 518 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 AL451064.1-201ENST00000607718 471 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 AC120349.3-201ENST00000624377 529 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.59□□□□□ -2.5
USH2AO75445 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 RNU6-743P-201ENST00000364151 106 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 RNU6-534P-201ENST00000364877 106 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-0.59□□□□□ -2.5
USH2AO75445 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.59□□□□□ -2.5
USH2AO75445 AL392103.1-201ENST00000447000 198 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.59□□□□□ -2.5
USH2AO75445 SNORA31.14-201ENST00000516728 116 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.59□□□□□ -2.5
USH2AO75445 MTND2P17-201ENST00000550281 688 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
USH2AO75445 SGO1P1-201ENST00000603525 1447 ntBASIC-0.59□□□□□ -2.5
USH2AO75445 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.6□□□□□ -2.5
USH2AO75445 FCF1P10-201ENST00000407590 479 ntBASIC-0.6□□□□□ -2.5
USH2AO75445 MTCO1P17-201ENST00000411522 491 ntBASIC-0.6□□□□□ -2.5
USH2AO75445 ELOCP14-201ENST00000428070 331 ntBASIC-0.6□□□□□ -2.5
USH2AO75445 ELOCP7-201ENST00000439968 331 ntBASIC-0.6□□□□□ -2.5
USH2AO75445 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.6□□□□□ -2.5
USH2AO75445 RNU6-948P-201ENST00000516374 107 ntBASIC-0.6□□□□□ -2.5
USH2AO75445 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.6□□□□□ -2.5
USH2AO75445 ZNF971P-201ENST00000562068 1249 ntBASIC-0.6□□□□□ -2.5
USH2AO75445 SNORD114-19-201ENST00000363072 75 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 MTND3P8-201ENST00000412909 339 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 MTATP6P27-201ENST00000416987 621 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.6□□□□□ -2.51
USH2AO75445 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.6□□□□□ -2.51
USH2AO75445 RNY3P4-201ENST00000384428 101 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 SNORA81-201ENST00000408493 178 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 AL592310.1-201ENST00000414330 671 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 MTND4LP10-201ENST00000435146 291 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 RNU6-135P-201ENST00000516769 101 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.6□□□□□ -2.51
USH2AO75445 AL157687.1-201ENST00000554853 619 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 MIR4752-201ENST00000579672 72 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.6□□□□□ -2.51
USH2AO75445 uc_338.10-201ENST00000621872 182 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 SNORD31B-201ENST00000364977 69 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 RNU6-54P-201ENST00000365563 107 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 MTND1P32-201ENST00000433043 938 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.6□□□□□ -2.51
USH2AO75445 SEPT14P24-201ENST00000447236 180 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 RNU7-55P-201ENST00000459426 62 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 SEPT14P4-201ENST00000513445 186 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.6□□□□□ -2.51
USH2AO75445 AC106754.2-201ENST00000623006 233 ntBASIC-0.6□□□□□ -2.51
USH2AO75445 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.61□□□□□ -2.51
USH2AO75445 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 RNU7-34P-201ENST00000459394 64 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 AP000676.1-201ENST00000533307 52 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 AC093519.1-201ENST00000566109 298 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 AL353997.4-201ENST00000586196 166 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 AC108081.1-201ENST00000604358 221 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 AC091965.4-201ENST00000607691 587 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.61□□□□□ -2.51
USH2AO75445 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 AC098592.1-201ENST00000419352 333 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 AL512286.1-201ENST00000439244 400 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 RNU7-156P-201ENST00000517214 74 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 AL606834.3-201ENST00000602615 496 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 AP001330.5-201ENST00000607176 411 ntBASIC-0.61□□□□□ -2.51
USH2AO75445 AL359075.3-201ENST00000613288 217 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms