Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 DEFB108E-201ENST00000524692 240 ntBASIC0.63□□□□□ -2.31
CDH16O75309 AP002004.2-201ENST00000531656 154 ntBASIC0.63□□□□□ -2.31
CDH16O75309 MIR3684-201ENST00000579779 74 ntBASIC0.63□□□□□ -2.31
CDH16O75309 AC091178.2-201ENST00000584401 117 ntBASIC0.63□□□□□ -2.31
CDH16O75309 MIR3942-201ENST00000585264 109 ntBASIC0.63□□□□□ -2.31
CDH16O75309 AC012557.2-201ENST00000605919 418 ntBASIC0.63□□□□□ -2.31
CDH16O75309 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.63□□□□□ -2.31
CDH16O75309 RNU4-12P-201ENST00000365233 139 ntBASIC0.62□□□□□ -2.31
CDH16O75309 Y_RNA.405-201ENST00000383979 100 ntBASIC0.62□□□□□ -2.31
CDH16O75309 Y_RNA.451-201ENST00000384200 100 ntBASIC0.62□□□□□ -2.31
CDH16O75309 Y_RNA.490-201ENST00000384413 102 ntBASIC0.62□□□□□ -2.31
CDH16O75309 RNY1P14-201ENST00000384426 108 ntBASIC0.62□□□□□ -2.31
CDH16O75309 Y_RNA.524-201ENST00000384564 100 ntBASIC0.62□□□□□ -2.31
CDH16O75309 Y_RNA.561-201ENST00000384694 100 ntBASIC0.62□□□□□ -2.31
CDH16O75309 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
CDH16O75309 RNU1-139P-201ENST00000391307 165 ntBASIC0.62□□□□□ -2.31
CDH16O75309 MTND3P23-201ENST00000431980 347 ntBASIC0.62□□□□□ -2.31
CDH16O75309 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.62□□□□□ -2.31
CDH16O75309 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.62□□□□□ -2.31
CDH16O75309 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
CDH16O75309 AP003484.1-201ENST00000530974 250 ntBASIC0.62□□□□□ -2.31
CDH16O75309 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.62□□□□□ -2.31
CDH16O75309 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.62□□□□□ -2.31
CDH16O75309 AL117336.2-201ENST00000602435 335 ntBASIC0.62□□□□□ -2.31
CDH16O75309 AL096861.1-201ENST00000610899 123 ntBASIC0.62□□□□□ -2.31
CDH16O75309 AL391903.3-201ENST00000612158 163 ntBASIC0.62□□□□□ -2.31
CDH16O75309 AC005592.1-201ENST00000566527 1640 ntBASIC0.61□□□□□ -2.31
CDH16O75309 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
CDH16O75309 RNU6-222P-201ENST00000362438 107 ntBASIC0.61□□□□□ -2.31
CDH16O75309 RNU6-595P-201ENST00000363944 107 ntBASIC0.61□□□□□ -2.31
CDH16O75309 Y_RNA.267-201ENST00000364679 109 ntBASIC0.61□□□□□ -2.31
CDH16O75309 SNORA20B-201ENST00000384220 132 ntBASIC0.61□□□□□ -2.31
CDH16O75309 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
CDH16O75309 MTND1P1-201ENST00000445453 368 ntBASIC0.61□□□□□ -2.31
CDH16O75309 AC091021.1-201ENST00000468051 388 ntBASIC0.61□□□□□ -2.31
CDH16O75309 AC018710.1-201ENST00000506509 158 ntBASIC0.61□□□□□ -2.31
CDH16O75309 SNORD111.1-201ENST00000516421 86 ntBASIC0.61□□□□□ -2.31
CDH16O75309 Y_RNA.683-201ENST00000516508 93 ntBASIC0.61□□□□□ -2.31
CDH16O75309 RNU6-107P-201ENST00000516643 102 ntBASIC0.61□□□□□ -2.31
CDH16O75309 SNORA4-201ENST00000584302 138 ntBASIC0.61□□□□□ -2.31
CDH16O75309 AC024614.3-201ENST00000637860 256 ntBASIC0.61□□□□□ -2.31
CDH16O75309 ZNF299P-201ENST00000406845 1804 ntBASIC0.6□□□□□ -2.31
CDH16O75309 MIRLET7C-201ENST00000362160 84 ntBASIC0.6□□□□□ -2.31
CDH16O75309 SNORA1B-201ENST00000362535 133 ntBASIC0.6□□□□□ -2.31
CDH16O75309 Y_RNA.41-201ENST00000362646 102 ntBASIC0.6□□□□□ -2.31
CDH16O75309 Y_RNA.122-201ENST00000363331 96 ntBASIC0.6□□□□□ -2.31
CDH16O75309 RNU6-1059P-201ENST00000363752 98 ntBASIC0.6□□□□□ -2.31
CDH16O75309 RNU6-1090P-201ENST00000364065 94 ntBASIC0.6□□□□□ -2.31
CDH16O75309 Y_RNA.796-201ENST00000364268 102 ntBASIC0.6□□□□□ -2.31
CDH16O75309 Y_RNA.799-201ENST00000364992 102 ntBASIC0.6□□□□□ -2.31
CDH16O75309 MTCYBP4-201ENST00000401524 249 ntBASIC0.6□□□□□ -2.31
CDH16O75309 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
CDH16O75309 AL035398.1-201ENST00000430869 322 ntBASIC0.6□□□□□ -2.31
CDH16O75309 RNU6-1114P-201ENST00000516022 107 ntBASIC0.6□□□□□ -2.31
CDH16O75309 MIR4273-201ENST00000582824 84 ntBASIC0.6□□□□□ -2.31
CDH16O75309 AC125232.2-201ENST00000592457 143 ntBASIC0.6□□□□□ -2.31
CDH16O75309 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CDH16O75309 MIR6734-201ENST00000621166 68 ntBASIC0.6□□□□□ -2.31
CDH16O75309 AC090617.10-201ENST00000624308 134 ntBASIC0.6□□□□□ -2.31
CDH16O75309 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.6□□□□□ -2.31
CDH16O75309 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CDH16O75309 RNU6-1148P-201ENST00000410992 104 ntBASIC0.59□□□□□ -2.31
CDH16O75309 RNU5A-5P-201ENST00000411054 116 ntBASIC0.59□□□□□ -2.31
CDH16O75309 RNU6-1001P-201ENST00000411265 100 ntBASIC0.59□□□□□ -2.31
CDH16O75309 ELOCP21-201ENST00000412558 336 ntBASIC0.59□□□□□ -2.31
CDH16O75309 AC018865.2-201ENST00000423631 129 ntBASIC0.59□□□□□ -2.31
CDH16O75309 USMG5P1-201ENST00000425964 177 ntBASIC0.59□□□□□ -2.31
CDH16O75309 MTND3P21-201ENST00000433774 331 ntBASIC0.59□□□□□ -2.31
CDH16O75309 snoU13.25-201ENST00000458945 104 ntBASIC0.59□□□□□ -2.31
CDH16O75309 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.59□□□□□ -2.31
CDH16O75309 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.59□□□□□ -2.31
CDH16O75309 AC046134.1-201ENST00000514454 666 ntBASIC0.59□□□□□ -2.31
CDH16O75309 RNU6-1088P-201ENST00000516850 104 ntBASIC0.59□□□□□ -2.31
CDH16O75309 AC022868.1-201ENST00000517767 391 ntBASIC0.59□□□□□ -2.31
CDH16O75309 AC093023.1-201ENST00000547375 507 ntBASIC0.59□□□□□ -2.31
CDH16O75309 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.59□□□□□ -2.31
CDH16O75309 AF250324.2-201ENST00000608299 610 ntBASIC0.59□□□□□ -2.31
CDH16O75309 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
CDH16O75309 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
CDH16O75309 MIR410-201ENST00000362222 80 ntBASIC0.58□□□□□ -2.32
CDH16O75309 RNU6-842P-201ENST00000384269 107 ntBASIC0.58□□□□□ -2.32
CDH16O75309 MIR329-1-201ENST00000385028 80 ntBASIC0.58□□□□□ -2.32
CDH16O75309 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.58□□□□□ -2.32
CDH16O75309 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.58□□□□□ -2.32
CDH16O75309 snoU13.18-201ENST00000459483 104 ntBASIC0.58□□□□□ -2.32
CDH16O75309 AC113410.1-201ENST00000505029 247 ntBASIC0.58□□□□□ -2.32
CDH16O75309 RNA5SP20-201ENST00000515976 84 ntBASIC0.58□□□□□ -2.32
CDH16O75309 RNU6-864P-201ENST00000516256 108 ntBASIC0.58□□□□□ -2.32
CDH16O75309 AL358944.1-201ENST00000528537 144 ntBASIC0.58□□□□□ -2.32
CDH16O75309 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
CDH16O75309 AC090617.3-201ENST00000573670 475 ntBASIC0.58□□□□□ -2.32
CDH16O75309 MIR4714-201ENST00000580728 77 ntBASIC0.58□□□□□ -2.32
CDH16O75309 AL357075.2-201ENST00000614906 189 ntBASIC0.58□□□□□ -2.32
CDH16O75309 SNORA27.1-201ENST00000362604 124 ntBASIC0.57□□□□□ -2.32
CDH16O75309 Y_RNA.106-201ENST00000363189 100 ntBASIC0.57□□□□□ -2.32
CDH16O75309 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.57□□□□□ -2.32
CDH16O75309 RNU6-1264P-201ENST00000383891 107 ntBASIC0.57□□□□□ -2.32
CDH16O75309 RNU6-1145P-201ENST00000384246 107 ntBASIC0.57□□□□□ -2.32
CDH16O75309 RNU6-376P-201ENST00000384731 106 ntBASIC0.57□□□□□ -2.32
CDH16O75309 MIR526A1-201ENST00000384897 85 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms