Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC008133.2-201ENST00000624540 351 ntBASIC0.16□□□□□ -2.38
SGCEO43556 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.15□□□□□ -2.39
SGCEO43556 RNU6-1105P-201ENST00000384774 107 ntBASIC0.15□□□□□ -2.39
SGCEO43556 MIR1298-201ENST00000408783 112 ntBASIC0.15□□□□□ -2.39
SGCEO43556 RNA5SP511-201ENST00000410487 115 ntBASIC0.15□□□□□ -2.39
SGCEO43556 AC243428.1-201ENST00000421099 264 ntBASIC0.15□□□□□ -2.39
SGCEO43556 AL031667.1-201ENST00000440222 725 ntBASIC0.15□□□□□ -2.39
SGCEO43556 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.15□□□□□ -2.39
SGCEO43556 AC074133.1-201ENST00000515696 183 ntBASIC0.15□□□□□ -2.39
SGCEO43556 Y_RNA.683-201ENST00000516508 93 ntBASIC0.15□□□□□ -2.39
SGCEO43556 RNU7-43P-201ENST00000516554 64 ntBASIC0.15□□□□□ -2.39
SGCEO43556 POLR3GP2-201ENST00000588366 668 ntBASIC0.15□□□□□ -2.39
SGCEO43556 AC127459.3-201ENST00000624328 466 ntBASIC0.15□□□□□ -2.39
SGCEO43556 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
SGCEO43556 SNORD114-23-201ENST00000363536 72 ntBASIC0.14□□□□□ -2.39
SGCEO43556 RNU4-45P-201ENST00000365469 141 ntBASIC0.14□□□□□ -2.39
SGCEO43556 RNY1P8-201ENST00000383970 114 ntBASIC0.14□□□□□ -2.39
SGCEO43556 MIR598-201ENST00000384868 97 ntBASIC0.14□□□□□ -2.39
SGCEO43556 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
SGCEO43556 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.14□□□□□ -2.39
SGCEO43556 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.14□□□□□ -2.39
SGCEO43556 AL137792.2-201ENST00000443484 235 ntBASIC0.14□□□□□ -2.39
SGCEO43556 RPS3AP17-201ENST00000472594 777 ntBASIC0.14□□□□□ -2.39
SGCEO43556 AC114811.1-201ENST00000507207 168 ntBASIC0.14□□□□□ -2.39
SGCEO43556 RNU6-1096P-201ENST00000517089 102 ntBASIC0.14□□□□□ -2.39
SGCEO43556 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.14□□□□□ -2.39
SGCEO43556 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.14□□□□□ -2.39
SGCEO43556 AC093027.1-201ENST00000546698 429 ntBASIC0.14□□□□□ -2.39
SGCEO43556 MIR4764-201ENST00000580680 88 ntBASIC0.14□□□□□ -2.39
SGCEO43556 AC007684.1-201ENST00000609671 477 ntBASIC0.14□□□□□ -2.39
SGCEO43556 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
SGCEO43556 AL603755.1-201ENST00000619504 163 ntBASIC0.14□□□□□ -2.39
SGCEO43556 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
SGCEO43556 SNORD68-201ENST00000363214 84 ntBASIC0.13□□□□□ -2.39
SGCEO43556 AL353193.1-201ENST00000421444 268 ntBASIC0.13□□□□□ -2.39
SGCEO43556 RNU7-187P-201ENST00000458985 68 ntBASIC0.13□□□□□ -2.39
SGCEO43556 snoU13.18-201ENST00000459483 104 ntBASIC0.13□□□□□ -2.39
SGCEO43556 RPL30P10-201ENST00000488148 337 ntBASIC0.13□□□□□ -2.39
SGCEO43556 AC023442.1-201ENST00000531247 422 ntBASIC0.13□□□□□ -2.39
SGCEO43556 FAM157A-202ENST00000615155 405 ntBASIC0.13□□□□□ -2.39
SGCEO43556 AC091931.1-201ENST00000623488 728 ntBASIC0.13□□□□□ -2.39
SGCEO43556 AC121333.1-201ENST00000567488 2709 ntBASIC0.13□□□□□ -2.39
SGCEO43556 RNU6-1264P-201ENST00000383891 107 ntBASIC0.12□□□□□ -2.39
SGCEO43556 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
SGCEO43556 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
SGCEO43556 AC046134.1-201ENST00000514454 666 ntBASIC0.12□□□□□ -2.39
SGCEO43556 RNU7-175P-201ENST00000515915 61 ntBASIC0.12□□□□□ -2.39
SGCEO43556 ACA59.1-201ENST00000515966 143 ntBASIC0.12□□□□□ -2.39
SGCEO43556 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.12□□□□□ -2.39
SGCEO43556 AC015726.2-201ENST00000620112 122 ntBASIC0.12□□□□□ -2.39
SGCEO43556 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SGCEO43556 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SGCEO43556 Y_RNA.1-201ENST00000352915 104 ntBASIC0.11□□□□□ -2.39
SGCEO43556 Y_RNA.151-201ENST00000363566 112 ntBASIC0.11□□□□□ -2.39
SGCEO43556 RNY1-201ENST00000364228 113 ntBASIC0.11□□□□□ -2.39
SGCEO43556 Y_RNA.381-201ENST00000365666 102 ntBASIC0.11□□□□□ -2.39
SGCEO43556 RNU2-70P-201ENST00000410718 179 ntBASIC0.11□□□□□ -2.39
SGCEO43556 RNU6-1304P-201ENST00000411374 106 ntBASIC0.11□□□□□ -2.39
SGCEO43556 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.11□□□□□ -2.39
SGCEO43556 RNU6-261P-201ENST00000459506 102 ntBASIC0.11□□□□□ -2.39
SGCEO43556 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.11□□□□□ -2.39
SGCEO43556 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.11□□□□□ -2.39
SGCEO43556 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.11□□□□□ -2.39
SGCEO43556 MIR4528-201ENST00000577763 90 ntBASIC0.11□□□□□ -2.39
SGCEO43556 AL050303.3-201ENST00000613704 284 ntBASIC0.11□□□□□ -2.39
SGCEO43556 AL138726.1-201ENST00000614873 333 ntBASIC0.11□□□□□ -2.39
SGCEO43556 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.11□□□□□ -2.39
SGCEO43556 AC007742.2-201ENST00000618226 398 ntBASIC0.11□□□□□ -2.39
SGCEO43556 MIR924-201ENST00000638017 53 ntBASIC0.11□□□□□ -2.39
SGCEO43556 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
SGCEO43556 Y_RNA.167-201ENST00000363735 109 ntBASIC0.1□□□□□ -2.39
SGCEO43556 Y_RNA.269-201ENST00000364685 89 ntBASIC0.1□□□□□ -2.39
SGCEO43556 RNU6-117P-201ENST00000365415 107 ntBASIC0.1□□□□□ -2.39
SGCEO43556 RNU4-20P-201ENST00000365601 151 ntBASIC0.1□□□□□ -2.39
SGCEO43556 AC117470.1-201ENST00000381974 330 ntBASIC0.1□□□□□ -2.39
SGCEO43556 SNORA2B-201ENST00000384583 137 ntBASIC0.1□□□□□ -2.39
SGCEO43556 MIR573-201ENST00000384964 99 ntBASIC0.1□□□□□ -2.39
SGCEO43556 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.1□□□□□ -2.39
SGCEO43556 AC005534.2-201ENST00000431047 433 ntBASIC0.1□□□□□ -2.39
SGCEO43556 MTND1P4-201ENST00000435196 415 ntBASIC0.1□□□□□ -2.39
SGCEO43556 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.1□□□□□ -2.39
SGCEO43556 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.1□□□□□ -2.39
SGCEO43556 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.1□□□□□ -2.39
SGCEO43556 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.1□□□□□ -2.39
SGCEO43556 U8.5-201ENST00000364528 136 ntBASIC0.09□□□□□ -2.4
SGCEO43556 Y_RNA.355-201ENST00000365462 98 ntBASIC0.09□□□□□ -2.4
SGCEO43556 MIR516B2-201ENST00000385190 85 ntBASIC0.09□□□□□ -2.4
SGCEO43556 MIR873-201ENST00000401120 77 ntBASIC0.09□□□□□ -2.4
SGCEO43556 AL392103.1-201ENST00000447000 198 ntBASIC0.09□□□□□ -2.4
SGCEO43556 MTND3P16-201ENST00000452205 344 ntBASIC0.09□□□□□ -2.4
SGCEO43556 SUMO1P2-201ENST00000452524 304 ntBASIC0.09□□□□□ -2.4
SGCEO43556 SNORA18.7-201ENST00000516910 131 ntBASIC0.09□□□□□ -2.4
SGCEO43556 AC073648.5-201ENST00000603502 305 ntBASIC0.09□□□□□ -2.4
SGCEO43556 RAC1P9-201ENST00000604990 392 ntBASIC0.09□□□□□ -2.4
SGCEO43556 AL355073.2-201ENST00000612106 557 ntBASIC0.09□□□□□ -2.4
SGCEO43556 Z69908.1-201ENST00000622603 247 ntBASIC0.09□□□□□ -2.4
SGCEO43556 AC099654.12-201ENST00000639868 649 ntBASIC0.09□□□□□ -2.4
SGCEO43556 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.09□□□□□ -2.4
SGCEO43556 Y_RNA.796-201ENST00000364268 102 ntBASIC0.08□□□□□ -2.4
SGCEO43556 Y_RNA.296-201ENST00000364930 108 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms