Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MIR526A1-201ENST00000384897 85 ntBASIC0.25□□□□□ -2.37
CHD2O14647 MIR136-201ENST00000385207 82 ntBASIC0.25□□□□□ -2.37
CHD2O14647 MIR153-2-201ENST00000385225 87 ntBASIC0.25□□□□□ -2.37
CHD2O14647 MTCO2P12-201ENST00000427426 682 ntBASIC0.25□□□□□ -2.37
CHD2O14647 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.25□□□□□ -2.37
CHD2O14647 AC107401.1-201ENST00000503426 685 ntBASIC0.25□□□□□ -2.37
CHD2O14647 RNU7-172P-201ENST00000517125 64 ntBASIC0.25□□□□□ -2.37
CHD2O14647 MIR5583-1-201ENST00000580941 59 ntBASIC0.25□□□□□ -2.37
CHD2O14647 AC017083.3-201ENST00000609955 700 ntBASIC0.25□□□□□ -2.37
CHD2O14647 Y_RNA.267-201ENST00000364679 109 ntBASIC0.24□□□□□ -2.37
CHD2O14647 SNORA2A-201ENST00000383885 135 ntBASIC0.24□□□□□ -2.37
CHD2O14647 RNA5SP25-201ENST00000410815 110 ntBASIC0.24□□□□□ -2.37
CHD2O14647 USMG5P1-201ENST00000425964 177 ntBASIC0.24□□□□□ -2.37
CHD2O14647 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.24□□□□□ -2.37
CHD2O14647 USP9YP29-201ENST00000445112 563 ntBASIC0.24□□□□□ -2.37
CHD2O14647 PCNPP5-201ENST00000452246 481 ntBASIC0.24□□□□□ -2.37
CHD2O14647 RNU7-187P-201ENST00000458985 68 ntBASIC0.24□□□□□ -2.37
CHD2O14647 TRBVB-201ENST00000477100 408 ntBASIC0.24□□□□□ -2.37
CHD2O14647 RNU7-43P-201ENST00000516554 64 ntBASIC0.24□□□□□ -2.37
CHD2O14647 AC011195.1-201ENST00000578177 177 ntBASIC0.24□□□□□ -2.37
CHD2O14647 MIR4764-201ENST00000580680 88 ntBASIC0.24□□□□□ -2.37
CHD2O14647 AL355073.2-201ENST00000612106 557 ntBASIC0.24□□□□□ -2.37
CHD2O14647 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CHD2O14647 RNU6-1158P-201ENST00000391167 107 ntBASIC0.24□□□□□ -2.37
CHD2O14647 MTCO3P19-201ENST00000415864 321 ntBASIC0.24□□□□□ -2.37
CHD2O14647 MTCO2P19-201ENST00000427513 598 ntBASIC0.24□□□□□ -2.37
CHD2O14647 AC073464.1-201ENST00000429823 534 ntBASIC0.24□□□□□ -2.37
CHD2O14647 RPL23AP50-201ENST00000434149 455 ntBASIC0.24□□□□□ -2.37
CHD2O14647 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.24□□□□□ -2.37
CHD2O14647 AC093303.1-201ENST00000514549 295 ntBASIC0.24□□□□□ -2.37
CHD2O14647 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.24□□□□□ -2.37
CHD2O14647 MIR4778-201ENST00000577635 80 ntBASIC0.24□□□□□ -2.37
CHD2O14647 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CHD2O14647 RNU6-89P-201ENST00000606519 100 ntBASIC0.24□□□□□ -2.37
CHD2O14647 MIR6516-201ENST00000630554 81 ntBASIC0.24□□□□□ -2.37
CHD2O14647 Y_RNA.296-201ENST00000364930 108 ntBASIC0.23□□□□□ -2.37
CHD2O14647 RNU6-407P-201ENST00000365280 104 ntBASIC0.23□□□□□ -2.37
CHD2O14647 SNORA2B-201ENST00000384583 137 ntBASIC0.23□□□□□ -2.37
CHD2O14647 SNORD41-201ENST00000386967 70 ntBASIC0.23□□□□□ -2.37
CHD2O14647 AC079354.2-201ENST00000453523 154 ntBASIC0.23□□□□□ -2.37
CHD2O14647 PCMTD1P1-201ENST00000455560 355 ntBASIC0.23□□□□□ -2.37
CHD2O14647 RNU6-1208P-201ENST00000459588 107 ntBASIC0.23□□□□□ -2.37
CHD2O14647 MTCO2P30-201ENST00000503662 364 ntBASIC0.23□□□□□ -2.37
CHD2O14647 RNU2-56P-201ENST00000516826 190 ntBASIC0.23□□□□□ -2.37
CHD2O14647 FRG2DP-202ENST00000566967 323 ntBASIC0.23□□□□□ -2.37
CHD2O14647 AC100812.1-201ENST00000607622 580 ntBASIC0.23□□□□□ -2.37
CHD2O14647 AL096861.1-201ENST00000610899 123 ntBASIC0.23□□□□□ -2.37
CHD2O14647 AL357075.2-201ENST00000614906 189 ntBASIC0.23□□□□□ -2.37
CHD2O14647 Z69908.1-201ENST00000622603 247 ntBASIC0.23□□□□□ -2.37
CHD2O14647 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CHD2O14647 MIR521-1-201ENST00000384902 87 ntBASIC0.22□□□□□ -2.37
CHD2O14647 MIR517A-201ENST00000385001 87 ntBASIC0.22□□□□□ -2.37
CHD2O14647 PIGPP3-201ENST00000425307 415 ntBASIC0.22□□□□□ -2.37
CHD2O14647 AL445567.1-201ENST00000439121 144 ntBASIC0.22□□□□□ -2.37
CHD2O14647 AC027419.1-201ENST00000522976 328 ntBASIC0.22□□□□□ -2.37
CHD2O14647 PIGPP4-201ENST00000584447 307 ntBASIC0.22□□□□□ -2.37
CHD2O14647 POLR3GP2-201ENST00000588366 668 ntBASIC0.22□□□□□ -2.37
CHD2O14647 AC004223.4-201ENST00000612426 332 ntBASIC0.22□□□□□ -2.37
CHD2O14647 uc_338.22-201ENST00000622722 187 ntBASIC0.22□□□□□ -2.37
CHD2O14647 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CHD2O14647 SNORD113-7-201ENST00000363762 77 ntBASIC0.22□□□□□ -2.37
CHD2O14647 Y_RNA.184-201ENST00000363884 108 ntBASIC0.22□□□□□ -2.37
CHD2O14647 SNORA26.8-201ENST00000391306 124 ntBASIC0.22□□□□□ -2.37
CHD2O14647 EIF4E2P1-201ENST00000393781 255 ntBASIC0.22□□□□□ -2.37
CHD2O14647 CALM2P4-201ENST00000430810 426 ntBASIC0.22□□□□□ -2.37
CHD2O14647 MTCO1P29-201ENST00000496868 288 ntBASIC0.22□□□□□ -2.37
CHD2O14647 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.22□□□□□ -2.37
CHD2O14647 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.22□□□□□ -2.37
CHD2O14647 AK6P2-201ENST00000549020 471 ntBASIC0.22□□□□□ -2.37
CHD2O14647 AC092807.2-201ENST00000609367 243 ntBASIC0.22□□□□□ -2.37
CHD2O14647 SNORA25.3-201ENST00000363205 127 ntBASIC0.21□□□□□ -2.38
CHD2O14647 RNU6-945P-201ENST00000383947 107 ntBASIC0.21□□□□□ -2.38
CHD2O14647 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
CHD2O14647 RNU6-790P-201ENST00000384479 105 ntBASIC0.21□□□□□ -2.38
CHD2O14647 MIR487A-201ENST00000385009 80 ntBASIC0.21□□□□□ -2.38
CHD2O14647 CCDC34P1-201ENST00000507441 517 ntBASIC0.21□□□□□ -2.38
CHD2O14647 AC010598.1-201ENST00000510378 103 ntBASIC0.21□□□□□ -2.38
CHD2O14647 RNA5SP401-201ENST00000515920 127 ntBASIC0.21□□□□□ -2.38
CHD2O14647 RNU6-1291P-201ENST00000516591 104 ntBASIC0.21□□□□□ -2.38
CHD2O14647 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.21□□□□□ -2.38
CHD2O14647 AC100830.2-201ENST00000581636 240 ntBASIC0.21□□□□□ -2.38
CHD2O14647 AL162730.1-201ENST00000605734 292 ntBASIC0.21□□□□□ -2.38
CHD2O14647 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
CHD2O14647 AL136317.1-201ENST00000612653 226 ntBASIC0.21□□□□□ -2.38
CHD2O14647 AL158063.1-201ENST00000615349 536 ntBASIC0.21□□□□□ -2.38
CHD2O14647 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.21□□□□□ -2.38
CHD2O14647 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
CHD2O14647 AC099654.12-201ENST00000639868 649 ntBASIC0.21□□□□□ -2.38
CHD2O14647 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
CHD2O14647 Y_RNA.319-201ENST00000365138 92 ntBASIC0.2□□□□□ -2.38
CHD2O14647 RNU6-128P-201ENST00000383976 107 ntBASIC0.2□□□□□ -2.38
CHD2O14647 SNORA36.2-201ENST00000384004 127 ntBASIC0.2□□□□□ -2.38
CHD2O14647 Y_RNA.415-201ENST00000384012 112 ntBASIC0.2□□□□□ -2.38
CHD2O14647 SNORD37.1-201ENST00000390968 65 ntBASIC0.2□□□□□ -2.38
CHD2O14647 MIR450B-201ENST00000401182 78 ntBASIC0.2□□□□□ -2.38
CHD2O14647 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.2□□□□□ -2.38
CHD2O14647 AP000870.1-201ENST00000472927 406 ntBASIC0.2□□□□□ -2.38
CHD2O14647 MIR4762-201ENST00000585261 75 ntBASIC0.2□□□□□ -2.38
CHD2O14647 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CHD2O14647 AC005592.1-201ENST00000566527 1640 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms