Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MTCO3P19-201ENST00000415864 321 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 RPL23AP50-201ENST00000434149 455 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 RPS3AP17-201ENST00000472594 777 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 AC018710.1-201ENST00000506509 158 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 AC091885.1-201ENST00000506658 268 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 SNORA70.12-201ENST00000516084 153 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 RNU6-107P-201ENST00000516643 102 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 RNU7-28P-201ENST00000516759 62 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 RNU6-1198P-201ENST00000516904 67 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 AC073114.1-201ENST00000612027 490 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 AC006435.5-201ENST00000624486 112 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 Y_RNA.280-201ENST00000364765 112 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.32□□□□□ -2.36
UBFD1O14562 RNY1P8-201ENST00000383970 114 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 RNU6-541P-201ENST00000384709 110 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 DAP3P1-201ENST00000441522 278 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.32□□□□□ -2.36
UBFD1O14562 U7.7-201ENST00000459276 60 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 AC093303.1-201ENST00000514549 295 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 RNU6-835P-201ENST00000516974 104 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.32□□□□□ -2.36
UBFD1O14562 AC073648.5-201ENST00000603502 305 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 7SK.7-201ENST00000603504 247 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 AP001330.5-201ENST00000607176 411 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 RNU6-94P-201ENST00000607728 107 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 AC244015.1-201ENST00000622301 99 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.32□□□□□ -2.36
UBFD1O14562 AC099654.12-201ENST00000639868 649 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 MTND5P16-201ENST00000460269 1703 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
UBFD1O14562 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
UBFD1O14562 RNU6-1252P-201ENST00000363054 104 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 Y_RNA.296-201ENST00000364930 108 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 Y_RNA.336-201ENST00000365307 109 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 RNU6-136P-201ENST00000384663 107 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 RNU6-95P-201ENST00000384697 107 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 RNA5SP482-201ENST00000391269 118 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 RNU4-55P-201ENST00000410731 137 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 ZNF885P-201ENST00000420174 1098 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.31□□□□□ -2.36
UBFD1O14562 AC244098.3-201ENST00000424803 96 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 PIGPP3-201ENST00000425307 415 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 AC092423.1-201ENST00000430165 186 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.31□□□□□ -2.36
UBFD1O14562 PCMTD1P1-201ENST00000455560 355 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 AC083798.1-201ENST00000472671 131 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.31□□□□□ -2.36
UBFD1O14562 RNU7-41P-201ENST00000515917 61 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 MTND4LP26-201ENST00000518144 282 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.31□□□□□ -2.36
UBFD1O14562 AP002004.2-201ENST00000531656 154 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.31□□□□□ -2.36
UBFD1O14562 AC018659.1-201ENST00000551083 169 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 RPL21P9-201ENST00000556149 474 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 AC007014.2-201ENST00000615581 479 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 SEPT14P17-201ENST00000617978 177 ntBASIC0.31□□□□□ -2.36
UBFD1O14562 MIR103A2-201ENST00000362154 78 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 RNU6-407P-201ENST00000365280 104 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 RNU6-1297P-201ENST00000384415 104 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 RNU6-648P-201ENST00000410190 107 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 RNU5A-5P-201ENST00000411054 116 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 AC018865.2-201ENST00000423631 129 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.3□□□□□ -2.36
UBFD1O14562 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.3□□□□□ -2.36
UBFD1O14562 RNA5SP20-201ENST00000515976 84 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 Y_RNA.695-201ENST00000516715 107 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 AC023442.1-201ENST00000531247 422 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.3□□□□□ -2.36
UBFD1O14562 AC011195.1-201ENST00000578177 177 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 PIGPP4-201ENST00000584447 307 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 AC023932.2-201ENST00000603176 175 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 RNU6-89P-201ENST00000606519 100 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 AC100810.6-201ENST00000638068 285 ntBASIC0.3□□□□□ -2.36
UBFD1O14562 RNU6-833P-201ENST00000363486 107 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 RNU6-280P-201ENST00000364145 104 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 RNU6-376P-201ENST00000384731 106 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 RNU6-1237P-201ENST00000384777 107 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 RNU1-119P-201ENST00000391122 165 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 RNA5SP63-201ENST00000391225 112 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 CALM2P3-201ENST00000400429 449 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 MIR891A-201ENST00000401237 79 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.29□□□□□ -2.36
UBFD1O14562 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.29□□□□□ -2.36
UBFD1O14562 AC105313.1-201ENST00000509121 353 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 AC036111.3-201ENST00000526389 112 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.29□□□□□ -2.36
UBFD1O14562 AC025627.3-201ENST00000582078 182 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 POLR3GP2-201ENST00000588366 668 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 AC119751.7-201ENST00000600494 245 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 AC010999.1-201ENST00000611856 324 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
UBFD1O14562 AC097520.1-201ENST00000624435 385 ntBASIC0.29□□□□□ -2.36
UBFD1O14562 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
UBFD1O14562 SNORA27.1-201ENST00000362604 124 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 RNU4-67P-201ENST00000364569 141 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 RNU6-281P-201ENST00000384212 103 ntBASIC0.28□□□□□ -2.36
UBFD1O14562 RNU6-1068P-201ENST00000410958 103 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms