Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 TPRKBP2-201ENST00000565969 475 ntBASIC1.26□□□□□ -2.21
CUX2O14529 AC005668.1-201ENST00000571142 476 ntBASIC1.26□□□□□ -2.21
CUX2O14529 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.26□□□□□ -2.21
CUX2O14529 AL355802.3-201ENST00000607571 545 ntBASIC1.26□□□□□ -2.21
CUX2O14529 U6.73-201ENST00000619194 103 ntBASIC1.26□□□□□ -2.21
CUX2O14529 AC008873.1-201ENST00000625051 138 ntBASIC1.26□□□□□ -2.21
CUX2O14529 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CUX2O14529 ZNF299P-201ENST00000406845 1804 ntBASIC1.26□□□□□ -2.21
CUX2O14529 Y_RNA.2-201ENST00000362330 96 ntBASIC1.25□□□□□ -2.21
CUX2O14529 Y_RNA.48-201ENST00000362710 103 ntBASIC1.25□□□□□ -2.21
CUX2O14529 RNU6-595P-201ENST00000363944 107 ntBASIC1.25□□□□□ -2.21
CUX2O14529 RNU6-534P-201ENST00000364877 106 ntBASIC1.25□□□□□ -2.21
CUX2O14529 Y_RNA.490-201ENST00000384413 102 ntBASIC1.25□□□□□ -2.21
CUX2O14529 RNU6-1215P-201ENST00000384441 102 ntBASIC1.25□□□□□ -2.21
CUX2O14529 MIR329-2-201ENST00000385029 84 ntBASIC1.25□□□□□ -2.21
CUX2O14529 SNORD115-47-201ENST00000391226 86 ntBASIC1.25□□□□□ -2.21
CUX2O14529 RNA5SP504-201ENST00000410676 117 ntBASIC1.25□□□□□ -2.21
CUX2O14529 AC243428.1-201ENST00000421099 264 ntBASIC1.25□□□□□ -2.21
CUX2O14529 AL139396.1-201ENST00000421137 167 ntBASIC1.25□□□□□ -2.21
CUX2O14529 SNORD65B-201ENST00000459126 73 ntBASIC1.25□□□□□ -2.21
CUX2O14529 RNU7-94P-201ENST00000459576 63 ntBASIC1.25□□□□□ -2.21
CUX2O14529 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CUX2O14529 RNU6-281P-201ENST00000384212 103 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AC016909.1-201ENST00000415916 166 ntBASIC1.24□□□□□ -2.21
CUX2O14529 Z95118.1-201ENST00000421372 247 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AC027419.1-201ENST00000522976 328 ntBASIC1.24□□□□□ -2.21
CUX2O14529 RAB11AP2-201ENST00000545905 639 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AC015688.6-201ENST00000577737 104 ntBASIC1.24□□□□□ -2.21
CUX2O14529 MIR8054-201ENST00000620877 86 ntBASIC1.24□□□□□ -2.21
CUX2O14529 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CUX2O14529 Y_RNA.184-201ENST00000363884 108 ntBASIC1.24□□□□□ -2.21
CUX2O14529 SNORA25.8-201ENST00000364831 128 ntBASIC1.24□□□□□ -2.21
CUX2O14529 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
CUX2O14529 RPS27P16-201ENST00000425758 201 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AL589823.1-201ENST00000429577 183 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AC005002.2-201ENST00000438228 269 ntBASIC1.24□□□□□ -2.21
CUX2O14529 PGBD4P5-201ENST00000445958 426 ntBASIC1.24□□□□□ -2.21
CUX2O14529 MTND4P18-201ENST00000447010 465 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AP000870.1-201ENST00000472927 406 ntBASIC1.24□□□□□ -2.21
CUX2O14529 RNU4-49P-201ENST00000516080 140 ntBASIC1.24□□□□□ -2.21
CUX2O14529 FRG2DP-202ENST00000566967 323 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AC004584.2-201ENST00000570407 410 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.24□□□□□ -2.21
CUX2O14529 MIR5695-201ENST00000579717 85 ntBASIC1.24□□□□□ -2.21
CUX2O14529 MIR4742-201ENST00000581069 85 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AL162424.1-201ENST00000602325 221 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AC100812.1-201ENST00000607622 580 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AL365434.2-201ENST00000607979 234 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AC040896.1-201ENST00000613819 479 ntBASIC1.24□□□□□ -2.21
CUX2O14529 AC090517.2-201ENST00000614966 680 ntBASIC1.24□□□□□ -2.21
CUX2O14529 U6.108-201ENST00000637764 58 ntBASIC1.24□□□□□ -2.21
CUX2O14529 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.23□□□□□ -2.21
CUX2O14529 AC091179.3-201ENST00000474761 144 ntBASIC1.23□□□□□ -2.21
CUX2O14529 AC093303.1-201ENST00000514549 295 ntBASIC1.23□□□□□ -2.21
CUX2O14529 SNORA62.5-201ENST00000516634 120 ntBASIC1.23□□□□□ -2.21
CUX2O14529 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.23□□□□□ -2.21
CUX2O14529 AK6P2-201ENST00000549020 471 ntBASIC1.23□□□□□ -2.21
CUX2O14529 MIR4790-201ENST00000577799 79 ntBASIC1.23□□□□□ -2.21
CUX2O14529 MIR5589-201ENST00000579442 60 ntBASIC1.23□□□□□ -2.21
CUX2O14529 AC022432.1-201ENST00000595739 310 ntBASIC1.23□□□□□ -2.21
CUX2O14529 AC068137.4-201ENST00000638485 296 ntBASIC1.23□□□□□ -2.21
CUX2O14529 RNU6-1123P-201ENST00000362347 106 ntBASIC1.22□□□□□ -2.21
CUX2O14529 RNU4-40P-201ENST00000364351 143 ntBASIC1.22□□□□□ -2.21
CUX2O14529 RNU6-1031P-201ENST00000384773 107 ntBASIC1.22□□□□□ -2.21
CUX2O14529 MIR10B-201ENST00000385011 110 ntBASIC1.22□□□□□ -2.21
CUX2O14529 RNU6-700P-201ENST00000391043 107 ntBASIC1.22□□□□□ -2.21
CUX2O14529 MRPL42P3-201ENST00000401492 326 ntBASIC1.22□□□□□ -2.21
CUX2O14529 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.22□□□□□ -2.21
CUX2O14529 SNORD5.1-201ENST00000458800 75 ntBASIC1.22□□□□□ -2.21
CUX2O14529 RPL30P7-201ENST00000479312 323 ntBASIC1.22□□□□□ -2.21
CUX2O14529 RNU6-351P-201ENST00000516097 100 ntBASIC1.22□□□□□ -2.21
CUX2O14529 RPL21P9-201ENST00000556149 474 ntBASIC1.22□□□□□ -2.21
CUX2O14529 CYP3A52P-201ENST00000563326 91 ntBASIC1.22□□□□□ -2.21
CUX2O14529 AC090617.3-201ENST00000573670 475 ntBASIC1.22□□□□□ -2.21
CUX2O14529 AL021879.1-201ENST00000611756 288 ntBASIC1.22□□□□□ -2.21
CUX2O14529 AC093783.1-201ENST00000612976 329 ntBASIC1.22□□□□□ -2.21
CUX2O14529 AC002553.4-201ENST00000616896 331 ntBASIC1.22□□□□□ -2.21
CUX2O14529 Y_RNA.516-201ENST00000384541 124 ntBASIC1.21□□□□□ -2.22
CUX2O14529 AL034345.1-201ENST00000407768 123 ntBASIC1.21□□□□□ -2.22
CUX2O14529 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
CUX2O14529 MTND3P23-201ENST00000431980 347 ntBASIC1.21□□□□□ -2.22
CUX2O14529 MTND1P34-201ENST00000438556 671 ntBASIC1.21□□□□□ -2.22
CUX2O14529 AL606517.2-201ENST00000442855 241 ntBASIC1.21□□□□□ -2.22
CUX2O14529 RNU6-329P-201ENST00000459618 107 ntBASIC1.21□□□□□ -2.22
CUX2O14529 RPS27P22-201ENST00000478056 241 ntBASIC1.21□□□□□ -2.22
CUX2O14529 AC010469.2-201ENST00000496412 480 ntBASIC1.21□□□□□ -2.22
CUX2O14529 AC010598.1-201ENST00000510378 103 ntBASIC1.21□□□□□ -2.22
CUX2O14529 RNU6-718P-201ENST00000516166 105 ntBASIC1.21□□□□□ -2.22
CUX2O14529 SNORA31.10-201ENST00000516482 106 ntBASIC1.21□□□□□ -2.22
CUX2O14529 Y_RNA.683-201ENST00000516508 93 ntBASIC1.21□□□□□ -2.22
CUX2O14529 AC022217.4-201ENST00000604389 163 ntBASIC1.21□□□□□ -2.22
CUX2O14529 AC021506.2-201ENST00000612354 169 ntBASIC1.21□□□□□ -2.22
CUX2O14529 MIR3688-2-201ENST00000636963 87 ntBASIC1.21□□□□□ -2.22
CUX2O14529 MTND5P16-201ENST00000460269 1703 ntBASIC1.21□□□□□ -2.22
CUX2O14529 Y_RNA.106-201ENST00000363189 100 ntBASIC1.2□□□□□ -2.22
CUX2O14529 MTCYBP4-201ENST00000401524 249 ntBASIC1.2□□□□□ -2.22
CUX2O14529 AC074085.1-201ENST00000413598 418 ntBASIC1.2□□□□□ -2.22
CUX2O14529 AC245047.3-201ENST00000429428 127 ntBASIC1.2□□□□□ -2.22
CUX2O14529 UBE2V1P7-201ENST00000446395 340 ntBASIC1.2□□□□□ -2.22
CUX2O14529 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms