Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SNORA27.1-201ENST00000362604 124 ntBASIC0.48□□□□□ -2.33
UPK1AO00322 Y_RNA.212-201ENST00000364177 102 ntBASIC0.48□□□□□ -2.33
UPK1AO00322 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.48□□□□□ -2.33
UPK1AO00322 RNU6-281P-201ENST00000384212 103 ntBASIC0.48□□□□□ -2.33
UPK1AO00322 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.48□□□□□ -2.33
UPK1AO00322 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.48□□□□□ -2.33
UPK1AO00322 HMGN2P26-201ENST00000463169 339 ntBASIC0.48□□□□□ -2.33
UPK1AO00322 AC022868.1-201ENST00000517767 391 ntBASIC0.48□□□□□ -2.33
UPK1AO00322 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.48□□□□□ -2.33
UPK1AO00322 NBR2-204ENST00000587322 63 ntBASIC0.48□□□□□ -2.33
UPK1AO00322 AC100812.1-201ENST00000607622 580 ntBASIC0.48□□□□□ -2.33
UPK1AO00322 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.48□□□□□ -2.33
UPK1AO00322 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
UPK1AO00322 MIRLET7C-201ENST00000362160 84 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 RNU6-833P-201ENST00000363486 107 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 SNORD116-11-201ENST00000383882 92 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 RNU6-483P-201ENST00000384088 108 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 Y_RNA.490-201ENST00000384413 102 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 RNU6-306P-201ENST00000384617 107 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 MIR526A1-201ENST00000384897 85 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 RNU1-139P-201ENST00000391307 165 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 RNU2-66P-201ENST00000410650 161 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 AC093019.1-201ENST00000443135 252 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.47□□□□□ -2.33
UPK1AO00322 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.47□□□□□ -2.33
UPK1AO00322 COX6CP6-201ENST00000490840 228 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 CYCTP-201ENST00000504253 315 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 Y_RNA.704-201ENST00000516851 102 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 RNU6-1116P-201ENST00000517269 99 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.47□□□□□ -2.33
UPK1AO00322 MIR5000-201ENST00000577717 103 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 MIR3672-201ENST00000584290 82 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 AL512605.2-201ENST00000592972 256 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 AC127459.3-201ENST00000624328 466 ntBASIC0.47□□□□□ -2.33
UPK1AO00322 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
UPK1AO00322 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
UPK1AO00322 MIR103A2-201ENST00000362154 78 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 RNU6-222P-201ENST00000362438 107 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 RNA5SP264-201ENST00000363115 107 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 Y_RNA.135-201ENST00000363439 95 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 RNU4-41P-201ENST00000364426 143 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 Y_RNA.336-201ENST00000365307 109 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 Y_RNA.414-201ENST00000384011 101 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 MIR452-201ENST00000385020 85 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.46□□□□□ -2.34
UPK1AO00322 AL035398.1-201ENST00000430869 322 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 AL137792.2-201ENST00000443484 235 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 RNU7-66P-201ENST00000459469 62 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.46□□□□□ -2.34
UPK1AO00322 AL358944.1-201ENST00000528537 144 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.46□□□□□ -2.34
UPK1AO00322 AC023827.1-201ENST00000569247 97 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 AC090617.3-201ENST00000573670 475 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 AC025627.3-201ENST00000582078 182 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 AC120024.3-201ENST00000603167 156 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 Z99129.1-201ENST00000612510 255 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 AC007014.2-201ENST00000615581 479 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 AC027514.1-201ENST00000588561 1603 ntBASIC0.46□□□□□ -2.34
UPK1AO00322 RNU6-595P-201ENST00000363944 107 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 Y_RNA.256-201ENST00000364594 104 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 SNORD89-201ENST00000390981 114 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 RNU6-332P-201ENST00000391193 108 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 RNU6-1001P-201ENST00000411265 100 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 PIGPP3-201ENST00000425307 415 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 AC092628.1-201ENST00000436250 252 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 MTND1P26-201ENST00000440488 538 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 Z98949.2-201ENST00000440996 144 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 RPS20P10-201ENST00000451209 253 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 AC067940.1-201ENST00000458411 300 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 AC019235.1-201ENST00000503847 207 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 AC113410.1-201ENST00000505029 247 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 RNU6-1096P-201ENST00000517089 102 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 MIR3192-201ENST00000584920 77 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 7SK.10-201ENST00000621414 298 ntBASIC0.45□□□□□ -2.34
UPK1AO00322 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 Y_RNA.106-201ENST00000363189 100 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 SNORD68-201ENST00000363214 84 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 Y_RNA.224-201ENST00000364308 111 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 RNU6-596P-201ENST00000365395 98 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 RNU6-136P-201ENST00000384663 107 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 RNU6-780P-201ENST00000391030 104 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 SNORD99-201ENST00000408612 74 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 RNU6-908P-201ENST00000410160 94 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 RNU5A-5P-201ENST00000411054 116 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 PCNPP5-201ENST00000452246 481 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.44□□□□□ -2.34
UPK1AO00322 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.44□□□□□ -2.34
UPK1AO00322 Y_RNA.676-201ENST00000516393 96 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 RNU6-273P-201ENST00000516937 96 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 AC027279.3-201ENST00000625055 122 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 MTND5P16-201ENST00000460269 1703 ntBASIC0.44□□□□□ -2.34
UPK1AO00322 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.44□□□□□ -2.34
UPK1AO00322 SNORD116-9-201ENST00000384000 95 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 SNORD116-3-201ENST00000384287 95 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 SNORD116-7-201ENST00000384404 95 ntBASIC0.43□□□□□ -2.34
UPK1AO00322 Y_RNA.498-201ENST00000384460 102 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms