Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 AC240442.1-201ENST00000616055 283 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.28-201ENST00000362554 111 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-137P-201ENST00000363680 108 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-338P-201ENST00000383888 105 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-20P-201ENST00000384106 107 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.458-201ENST00000384240 102 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-937P-201ENST00000384325 106 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 RNY3P4-201ENST00000384428 101 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.512-201ENST00000384518 102 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 MIR300-201ENST00000401138 83 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.595-201ENST00000410403 105 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-121P-201ENST00000410525 99 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 AP1B1P2-201ENST00000416196 106 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 HSPE1P9-201ENST00000440046 311 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 UBE2V1P7-201ENST00000446395 340 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 PCNPP5-201ENST00000452246 481 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 SNORD65B-201ENST00000459126 73 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 MIR3145-201ENST00000580727 82 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 VN1R91P-201ENST00000594377 169 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 AC016925.2-201ENST00000605108 242 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 AC004467.1-201ENST00000615678 330 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 U1.36-201ENST00000620684 176 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 AC134503.1-201ENST00000633048 54 ntBASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.29□□□□□ -2.2
TRIM49D1C9J1S8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 snoU2-30.2-201ENST00000362805 70 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 Y_RNA.153-201ENST00000363615 91 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 U3.8-201ENST00000363675 217 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 RNU1-96P-201ENST00000364163 162 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 SNORA20B-201ENST00000384220 132 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-296P-201ENST00000384608 107 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 MIR30A-201ENST00000385092 71 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 SNORA48.1-201ENST00000390879 135 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 RNA5SP109-201ENST00000391010 116 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 RNU6-823P-201ENST00000391042 103 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 AL135790.2-201ENST00000437701 267 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 MTND5P22-201ENST00000458380 195 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 RNU1-131P-201ENST00000458943 161 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 RNA5SP57-201ENST00000459463 123 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 AL160236.1-201ENST00000556317 195 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 AC095038.3-201ENST00000634439 195 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 AC005592.1-201ENST00000566527 1640 ntBASIC1.28□□□□□ -2.2
TRIM49D1C9J1S8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.39-201ENST00000362620 98 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 SNORD81.1-201ENST00000363064 77 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.143-201ENST00000363520 106 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-112P-201ENST00000363599 104 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 RNU1-115P-201ENST00000365329 160 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 SNORD78.2-201ENST00000391076 69 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 RNU7-95P-201ENST00000459222 64 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 U8.20-201ENST00000459445 131 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 MTATP8P1-201ENST00000467115 207 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 AC004223.1-201ENST00000479840 271 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 AC098869.1-201ENST00000481627 292 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 AC144568.1-201ENST00000520139 137 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 AC008269.2-201ENST00000561915 1105 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 SUB1P4-201ENST00000566062 339 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 snoU13.31-201ENST00000607291 104 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 U6.115-201ENST00000636045 103 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 MIR3674-201ENST00000636576 68 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 AC099654.10-201ENST00000640395 161 ntBASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.27-201ENST00000362540 103 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-626P-201ENST00000363354 107 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 SNORD115-30-201ENST00000364117 82 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.338-201ENST00000365320 114 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 RNU6-1264P-201ENST00000383891 107 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 Y_RNA.471-201ENST00000384312 102 ntBASIC1.26□□□□□ -2.21
TRIM49D1C9J1S8 SNORD116-13-201ENST00000384408 92 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms