Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 SNORD111.1-201ENST00000516421 86 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 AC023442.1-201ENST00000531247 422 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 AC002553.4-201ENST00000616896 331 ntBASIC1.24□□□□□ -2.21
HMGB1P1B2RPK0 Y_RNA.88-201ENST00000363029 99 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 U8.2-201ENST00000363156 134 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 RNU6-99P-201ENST00000364721 107 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 SNORD114-24-201ENST00000365029 72 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 RNU6-969P-201ENST00000383900 105 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 RNU6-926P-201ENST00000384075 107 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 SNORD12-201ENST00000391002 90 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 MIR942-201ENST00000401111 86 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 AF235103.2-201ENST00000525753 346 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 AC007014.2-201ENST00000615581 479 ntBASIC1.23□□□□□ -2.21
HMGB1P1B2RPK0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 RPS29P28-201ENST00000446439 141 ntBASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 ELOCP24-201ENST00000456370 334 ntBASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 MIR2053-201ENST00000459295 91 ntBASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 AC011352.1-201ENST00000512300 793 ntBASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 RNU6-120P-201ENST00000516077 103 ntBASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 AL645939.4-201ENST00000604495 135 ntBASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 AC084782.3-201ENST00000612282 578 ntBASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 AC073869.6-201ENST00000640656 341 ntBASIC1.22□□□□□ -2.21
HMGB1P1B2RPK0 MIR410-201ENST00000362222 80 ntBASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 SNORA75.2-201ENST00000391138 150 ntBASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 SNORA75.3-201ENST00000391231 150 ntBASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 SNORA75.4-201ENST00000391278 119 ntBASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 AL354751.2-201ENST00000415471 210 ntBASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 AC090142.3-201ENST00000519012 385 ntBASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 AC011712.1-201ENST00000588959 234 ntBASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 AC120024.3-201ENST00000603167 156 ntBASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 AL008636.1-201ENST00000625038 1018 ntBASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMGB1P1B2RPK0 RNU6-1301P-201ENST00000362724 104 ntBASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 Y_RNA.339-201ENST00000365325 102 ntBASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 Y_RNA.482-201ENST00000384377 111 ntBASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 BTF3P4-201ENST00000418852 495 ntBASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 RPL17P19-201ENST00000489069 552 ntBASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 AC114811.1-201ENST00000507207 168 ntBASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 AC005828.6-201ENST00000606610 232 ntBASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 AC004467.1-201ENST00000615678 330 ntBASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
HMGB1P1B2RPK0 UBE2DNL-203ENST00000474922 222 ntBASIC1.19□□□□□ -2.22
HMGB1P1B2RPK0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.19□□□□□ -2.22
HMGB1P1B2RPK0 MIR3192-201ENST00000584920 77 ntBASIC1.19□□□□□ -2.22
HMGB1P1B2RPK0 RNU6-961P-201ENST00000363893 105 ntBASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 Y_RNA.243-201ENST00000364481 109 ntBASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 POLR2J4-204ENST00000418424 324 ntBASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 RPS20P10-201ENST00000451209 253 ntBASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 snoU13.25-201ENST00000458945 104 ntBASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 CYCTP-201ENST00000504253 315 ntBASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 RNU6-1337P-201ENST00000516525 95 ntBASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 AC055872.1-201ENST00000570978 278 ntBASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 AC211469.2-201ENST00000605461 205 ntBASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 SCARNA15.3-201ENST00000626315 122 ntBASIC1.18□□□□□ -2.22
HMGB1P1B2RPK0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 RNU4-40P-201ENST00000364351 143 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 RNU6-1310P-201ENST00000384153 107 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 MIR516B2-201ENST00000385190 85 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 RPS3AP1-201ENST00000413190 320 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 RPS4XP11-201ENST00000446897 772 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 RNU7-21P-201ENST00000459430 62 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 MTND4P17-201ENST00000470444 350 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 PSMC1P5-201ENST00000512850 177 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 RNU6-197P-201ENST00000516680 100 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 RNU7-30P-201ENST00000516835 62 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 RNU6-295P-201ENST00000516901 104 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 AC005899.2-201ENST00000584353 90 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 AC004832.4-201ENST00000608952 331 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 AL591926.4-201ENST00000616895 298 ntBASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGB1P1B2RPK0 AC023934.1-201ENST00000574529 2389 ntBASIC1.16□□□□□ -2.22
HMGB1P1B2RPK0 Y_RNA.6-201ENST00000362350 114 ntBASIC1.16□□□□□ -2.22
HMGB1P1B2RPK0 RNU6-833P-201ENST00000363486 107 ntBASIC1.16□□□□□ -2.22
HMGB1P1B2RPK0 RNU1-36P-201ENST00000365130 165 ntBASIC1.16□□□□□ -2.22
HMGB1P1B2RPK0 RNA5SP190-201ENST00000365222 118 ntBASIC1.16□□□□□ -2.22
HMGB1P1B2RPK0 SNORD116-13-201ENST00000384408 92 ntBASIC1.16□□□□□ -2.22
HMGB1P1B2RPK0 MIR605-201ENST00000385078 83 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms