Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHA3Q9Y5H8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 RNA5SP68-201ENST00000363885 119 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 SNORD114-30-201ENST00000364448 72 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 HSPE1P13-201ENST00000451143 297 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 RPL23AP94-201ENST00000512518 302 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 Y_RNA.673-201ENST00000516306 88 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 SNORA31.11-201ENST00000516528 139 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 RPL21P9-201ENST00000556149 474 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 AL031274.2-201ENST00000599419 203 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 AC010900.2-201ENST00000604508 210 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 AL353149.1-201ENST00000610667 244 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 CENPCP1-201ENST00000533085 2578 ntBASIC2.47□□□□□ -2.01
PCDHA3Q9Y5H8 ZNF720P1-201ENST00000562403 1939 ntBASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.60-201ENST00000362831 98 ntBASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 RNA5SP493-201ENST00000364115 91 ntBASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.275-201ENST00000364726 110 ntBASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.477-201ENST00000384352 108 ntBASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 SNORA80E-201ENST00000384744 137 ntBASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 RNA5SP82-201ENST00000516707 92 ntBASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 MIR3169-201ENST00000578032 83 ntBASIC2.46□□□□□ -2.02
PCDHA3Q9Y5H8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 snoU2-30.2-201ENST00000362805 70 ntBASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.368-201ENST00000365547 113 ntBASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.539-201ENST00000384635 107 ntBASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 MIR1253-201ENST00000408273 105 ntBASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 AC010154.1-201ENST00000425857 269 ntBASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 RPS26P55-201ENST00000471178 356 ntBASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 RNA5SP20-201ENST00000515976 84 ntBASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 AL137100.2-201ENST00000555786 315 ntBASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 AC103810.6-201ENST00000606708 136 ntBASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 MIR6817-201ENST00000615588 66 ntBASIC2.45□□□□□ -2.02
PCDHA3Q9Y5H8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 AC005336.3-201ENST00000623833 2679 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 RNU1-58P-201ENST00000362413 163 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.124-201ENST00000363339 93 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.217-201ENST00000364214 105 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.277-201ENST00000364754 102 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.456-201ENST00000384232 111 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-847P-201ENST00000411115 108 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 AC018634.1-201ENST00000437554 401 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.641-201ENST00000459414 105 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 RNA5SP148-201ENST00000516527 94 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 AC136628.3-201ENST00000521868 290 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 AL162424.1-201ENST00000602325 221 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 MIR338-201ENST00000636369 67 ntBASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHA3Q9Y5H8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.82-201ENST00000363000 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.92-201ENST00000363043 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 SNORD27-201ENST00000363981 72 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.235-201ENST00000364412 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-740P-201ENST00000364734 105 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.287-201ENST00000364853 94 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.306-201ENST00000365015 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.312-201ENST00000365089 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.322-201ENST00000365151 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 AC007064.1-201ENST00000412238 351 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 HMGN2P34-201ENST00000437647 269 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 ATP5J2P3-201ENST00000451550 258 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.650-201ENST00000459002 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-1041P-201ENST00000516254 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.777-201ENST00000516982 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 MIR4643-201ENST00000577473 78 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 AC005357.1-201ENST00000588399 301 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.771-201ENST00000598668 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 AL078604.3-201ENST00000615580 211 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 AC141273.2-201ENST00000618989 130 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 U6.73-201ENST00000619194 103 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.789-201ENST00000622480 102 ntBASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.43□□□□□ -2.02
PCDHA3Q9Y5H8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 MIR449A-201ENST00000362113 91 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.54-201ENST00000362766 105 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-23P-201ENST00000363283 107 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 RNU1-96P-201ENST00000364163 162 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.310-201ENST00000365063 113 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-407P-201ENST00000365280 104 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 HMGN2P39-201ENST00000398005 273 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 AL117342.1-201ENST00000404861 406 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms