Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RNU6-831P-201ENST00000384548 107 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 RNU11-5P-201ENST00000391216 129 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 AL451046.2-201ENST00000403074 277 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 RNU6-733P-201ENST00000410759 104 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.69□□□□□ -2.3
LRRC42Q9Y546 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 AC018865.2-201ENST00000423631 129 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 AC002429.1-201ENST00000437672 148 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 AC093850.1-201ENST00000454121 251 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 SNORD124-201ENST00000459577 104 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.706-201ENST00000516933 99 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 RNU6-341P-201ENST00000516973 96 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 CBX3P8-201ENST00000532412 525 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.69□□□□□ -2.3
LRRC42Q9Y546 AL359821.1-201ENST00000605519 182 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 AC100812.1-201ENST00000607622 580 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
LRRC42Q9Y546 MIRLET7C-201ENST00000362160 84 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.48-201ENST00000362710 103 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.124-201ENST00000363339 93 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.267-201ENST00000364679 109 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 SNORD114-24-201ENST00000365029 72 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 RNU6-53P-201ENST00000365367 106 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 SNORA2.2-201ENST00000365473 135 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 MIR181A1-201ENST00000385026 110 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 MIR329-1-201ENST00000385028 80 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 ELOCP21-201ENST00000412558 336 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 EIF1P2-201ENST00000428233 350 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 SNORD5.1-201ENST00000458800 75 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.68□□□□□ -2.3
LRRC42Q9Y546 AC022493.2-201ENST00000506122 481 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 RNU6-113P-201ENST00000516653 101 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 RNU7-28P-201ENST00000516759 62 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 RNU2-56P-201ENST00000516826 190 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 MIR5701-3-201ENST00000578890 82 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.68□□□□□ -2.3
LRRC42Q9Y546 MIR5701-1-201ENST00000585138 82 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 AC080078.3-201ENST00000605407 463 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 AL357075.2-201ENST00000614906 189 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 MIR5701-2-201ENST00000615634 82 ntBASIC0.68□□□□□ -2.3
LRRC42Q9Y546 MTND5P16-201ENST00000460269 1703 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 SNORA27.1-201ENST00000362604 124 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 RNY4P14-201ENST00000363656 96 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 RNU6-407P-201ENST00000365280 104 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 RNU6-1080P-201ENST00000383982 107 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 AC114482.1-201ENST00000418010 247 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 Z83846.1-201ENST00000446798 265 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 UQCRBP2-201ENST00000447827 297 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 RPS26P48-201ENST00000491713 339 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.67□□□□□ -2.3
LRRC42Q9Y546 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.67□□□□□ -2.3
LRRC42Q9Y546 RNA5SP20-201ENST00000515976 84 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 RNU6-322P-201ENST00000516010 103 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 RNU6-947P-201ENST00000516264 106 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 RNU6-566P-201ENST00000516790 107 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 RNU1-54P-201ENST00000517181 120 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 AP002004.2-201ENST00000531656 154 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 RPL21P9-201ENST00000556149 474 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 AC090617.3-201ENST00000573670 475 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 AL117336.2-201ENST00000602435 335 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 AL357312.1-201ENST00000603879 298 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 AC100810.6-201ENST00000638068 285 ntBASIC0.67□□□□□ -2.3
LRRC42Q9Y546 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.67□□□□□ -2.3
LRRC42Q9Y546 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.67□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.89-201ENST00000363031 102 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.66□□□□□ -2.3
LRRC42Q9Y546 RNU6-969P-201ENST00000383900 105 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.554-201ENST00000384672 102 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 MIR562-201ENST00000384894 95 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 Y_RNA.595-201ENST00000410403 105 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 DLGAP5P1-201ENST00000430307 464 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 AC104332.1-201ENST00000440471 797 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 AL137792.2-201ENST00000443484 235 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 MTND2P22-201ENST00000444325 1033 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 HMGN1P7-201ENST00000491722 313 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 RNU6-1291P-201ENST00000516591 104 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 AP002001.1-203ENST00000534002 267 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 AL121579.1-201ENST00000555129 305 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 AC004817.2-201ENST00000561794 651 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.66□□□□□ -2.3
LRRC42Q9Y546 MIR3684-201ENST00000579779 74 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 MIR6128-201ENST00000615528 109 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 MIR3662-201ENST00000637030 95 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.66□□□□□ -2.3
LRRC42Q9Y546 AC073544.1-201ENST00000600110 1595 ntBASIC0.66□□□□□ -2.3
LRRC42Q9Y546 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.9-201ENST00000362354 101 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 RNU6-874P-201ENST00000362390 105 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 RNA5SP361-201ENST00000362686 118 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 Y_RNA.157-201ENST00000363638 102 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 RNU6-117P-201ENST00000365415 107 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 RNU6-1145P-201ENST00000384246 107 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 SNORA80D-201ENST00000384488 135 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 RNU6-376P-201ENST00000384731 106 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 RNA5SP482-201ENST00000391269 118 ntBASIC0.65□□□□□ -2.31
LRRC42Q9Y546 MTCYBP4-201ENST00000401524 249 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms