Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 Y_RNA.383-201ENST00000383855 97 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 SNORA20B-201ENST00000384220 132 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 Y_RNA.541-201ENST00000384640 113 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 Y_RNA.569-201ENST00000384749 103 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 MIR518A2-201ENST00000384966 87 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PKP3Q9Y446 AL355796.1-201ENST00000406706 323 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 SNORA3.2-201ENST00000408221 125 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 HMGN2P34-201ENST00000437647 269 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.13□□□□□ -2.07
PKP3Q9Y446 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.13□□□□□ -2.07
PKP3Q9Y446 RNU6-1041P-201ENST00000516254 102 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 AC027419.1-201ENST00000522976 328 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.13□□□□□ -2.07
PKP3Q9Y446 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.13□□□□□ -2.07
PKP3Q9Y446 AC005828.6-201ENST00000606610 232 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 AC037487.3-201ENST00000606668 112 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.15-201ENST00000611544 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.16-201ENST00000613119 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.12-201ENST00000613778 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.20-201ENST00000613956 192 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.9-201ENST00000615427 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.11-201ENST00000616345 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.2-201ENST00000616535 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.3-201ENST00000617785 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.19-201ENST00000618602 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 RNU2-1-201ENST00000618664 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.6-201ENST00000619225 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.5-201ENST00000619465 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 U2.10-201ENST00000620268 191 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 AC006435.5-201ENST00000624486 112 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.13□□□□□ -2.07
PKP3Q9Y446 MIR203B-201ENST00000636080 86 ntBASIC2.13□□□□□ -2.07
PKP3Q9Y446 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PKP3Q9Y446 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.12□□□□□ -2.07
PKP3Q9Y446 snoU2-30.2-201ENST00000362805 70 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 Y_RNA.452-201ENST00000384202 108 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 RNU6-574P-201ENST00000384265 107 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 RNU6-472P-201ENST00000384299 107 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 Y_RNA.483-201ENST00000384380 101 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 MT-TW-201ENST00000387382 68 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 SNORA53-201ENST00000391141 249 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 MIR873-201ENST00000401120 77 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.12□□□□□ -2.07
PKP3Q9Y446 AL121890.1-201ENST00000435457 205 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.12□□□□□ -2.07
PKP3Q9Y446 SNORA70.12-201ENST00000516084 153 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 RNU6-436P-201ENST00000516171 114 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 IGLV3-17-201ENST00000519099 244 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 AP005660.1-201ENST00000522972 293 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.12□□□□□ -2.07
PKP3Q9Y446 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.12□□□□□ -2.07
PKP3Q9Y446 MIR3149-201ENST00000584629 83 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.12□□□□□ -2.07
PKP3Q9Y446 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 ZNF658B-202ENST00000615961 3375 ntBASIC2.12□□□□□ -2.07
PKP3Q9Y446 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.12□□□□□ -2.07
PKP3Q9Y446 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
PKP3Q9Y446 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PKP3Q9Y446 Y_RNA.288-201ENST00000364854 92 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 RNU6-702P-201ENST00000364982 107 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 Y_RNA.329-201ENST00000365209 107 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 RNU6-407P-201ENST00000365280 104 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 SNORA6-201ENST00000384033 151 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 RNA5SP465-201ENST00000391195 109 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 AL355497.1-201ENST00000406262 551 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 MRPS10P1-201ENST00000448483 130 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 RNU6-1338P-201ENST00000516328 91 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.11□□□□□ -2.07
PKP3Q9Y446 AC121758.2-201ENST00000553271 193 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 DEFB117-201ENST00000602356 141 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 AL353149.1-201ENST00000610667 244 ntBASIC2.11□□□□□ -2.07
PKP3Q9Y446 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
PKP3Q9Y446 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PKP3Q9Y446 Y_RNA.16-201ENST00000362421 102 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 SNORD114-7-201ENST00000362520 77 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 SNORA27.1-201ENST00000362604 124 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 SNORA16B-201ENST00000364674 135 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 Y_RNA.361-201ENST00000365515 120 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 MIR597-201ENST00000384968 97 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 RNU11-3P-201ENST00000391111 133 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 RN7SKP192-201ENST00000411291 327 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 AC024067.1-201ENST00000426199 223 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 MTND4LP30-201ENST00000454092 297 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 RPS27P22-201ENST00000478056 241 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 YWHAEP4-201ENST00000505390 198 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 RPL23AP94-201ENST00000512518 302 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 RNU2-31P-201ENST00000516954 155 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 DEFB108E-201ENST00000524692 240 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 AC091544.4-201ENST00000555268 342 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 AL137100.2-201ENST00000555786 315 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 AC005786.1-201ENST00000588553 154 ntBASIC2.1□□□□□ -2.07
PKP3Q9Y446 AC010615.1-201ENST00000594254 1764 ntBASIC2.09□□□□□ -2.07
PKP3Q9Y446 AL391987.6-201ENST00000305671 199 ntBASIC2.09□□□□□ -2.07
PKP3Q9Y446 Y_RNA.124-201ENST00000363339 93 ntBASIC2.09□□□□□ -2.07
PKP3Q9Y446 RNU6-326P-201ENST00000365480 107 ntBASIC2.09□□□□□ -2.07
PKP3Q9Y446 RNU6-514P-201ENST00000384208 107 ntBASIC2.09□□□□□ -2.07
PKP3Q9Y446 RNU6-417P-201ENST00000384712 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms