Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SDR42E1P4-201ENST00000620894 481 ntBASIC2.19□□□□□ -2.06
LRFN1Q9P244 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LRFN1Q9P244 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
LRFN1Q9P244 Y_RNA.230-201ENST00000364348 109 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 RNU6-20P-201ENST00000384106 107 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 RNU6-417P-201ENST00000384712 107 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 RNA5SP100-201ENST00000410903 110 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 RNA5SP59-201ENST00000410922 110 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 AC009310.1-201ENST00000414414 451 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.18□□□□□ -2.06
LRFN1Q9P244 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.18□□□□□ -2.06
LRFN1Q9P244 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.18□□□□□ -2.06
LRFN1Q9P244 AC098869.1-201ENST00000481627 292 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 RNU6-1143P-201ENST00000516125 104 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.18□□□□□ -2.06
LRFN1Q9P244 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 AL773524.1-201ENST00000614065 229 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 MIR8062-201ENST00000621515 85 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.18□□□□□ -2.06
LRFN1Q9P244 U6.115-201ENST00000636045 103 ntBASIC2.18□□□□□ -2.06
LRFN1Q9P244 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
LRFN1Q9P244 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
LRFN1Q9P244 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
LRFN1Q9P244 RNU6-1019P-201ENST00000364424 107 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 RNU6-937P-201ENST00000384325 106 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 SNORD115-46-201ENST00000390982 71 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 RNA5SP212-201ENST00000391223 107 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 MIR1302-3-201ENST00000408128 138 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 MIR1289-2-201ENST00000408360 111 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AC244636.1-201ENST00000421152 228 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AL356320.1-201ENST00000429616 163 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.17□□□□□ -2.06
LRFN1Q9P244 SUMO1P2-201ENST00000452524 304 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 snoU13.23-201ENST00000458863 104 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 RNU2-12P-201ENST00000517216 168 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AC024995.1-201ENST00000523014 93 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AC121758.2-201ENST00000553271 193 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AL161670.1-201ENST00000554348 137 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.17□□□□□ -2.06
LRFN1Q9P244 AC055872.1-201ENST00000570978 278 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 MIR5694-201ENST00000581190 76 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 MIR3149-201ENST00000584629 83 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AC006380.1-201ENST00000603598 186 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AC010900.2-201ENST00000604508 210 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AP000942.4-201ENST00000604811 241 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 MIR6840-201ENST00000611937 71 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AC004467.1-201ENST00000615678 330 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 U4.1-201ENST00000620349 87 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AC091932.3-201ENST00000624223 323 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 AC016717.2-201ENST00000609089 5141 ntBASIC2.17□□□□□ -2.06
LRFN1Q9P244 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
LRFN1Q9P244 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LRFN1Q9P244 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
LRFN1Q9P244 Y_RNA.243-201ENST00000364481 109 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 Y_RNA.452-201ENST00000384202 108 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LRFN1Q9P244 RNU5A-5P-201ENST00000411054 116 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.16□□□□□ -2.06
LRFN1Q9P244 AL390729.2-201ENST00000416137 156 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 RPL21P38-201ENST00000418090 167 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 AC245047.4-201ENST00000433189 144 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.16□□□□□ -2.06
LRFN1Q9P244 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.16□□□□□ -2.06
LRFN1Q9P244 AC108210.2-201ENST00000503681 201 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LRFN1Q9P244 AC025465.3-201ENST00000510570 311 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 AP003733.2-201ENST00000529409 171 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.16□□□□□ -2.06
LRFN1Q9P244 AL137100.2-201ENST00000555786 315 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 AC022254.1-201ENST00000567857 235 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 MIR4299-201ENST00000577899 72 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 MIR4423-201ENST00000580922 80 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 MIR4300-201ENST00000581016 96 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.16□□□□□ -2.06
LRFN1Q9P244 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.16□□□□□ -2.06
LRFN1Q9P244 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.16□□□□□ -2.06
LRFN1Q9P244 RNU6-112P-201ENST00000363599 104 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 Y_RNA.193-201ENST00000363979 102 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 Y_RNA.361-201ENST00000365515 120 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 Y_RNA.376-201ENST00000365638 108 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 SNORD63-201ENST00000384262 68 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 Y_RNA.462-201ENST00000384268 102 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 RNU6-713P-201ENST00000384761 107 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 MIR215-201ENST00000384858 110 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 MIR764-201ENST00000390811 85 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 AL355796.1-201ENST00000406706 323 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 AL591806.2-201ENST00000433122 173 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 AC018634.1-201ENST00000437554 401 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 AC005002.2-201ENST00000438228 269 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 RPS12P2-201ENST00000439728 269 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 IGLV3-17-201ENST00000519099 244 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.15□□□□□ -2.07
LRFN1Q9P244 DEFB122-202ENST00000569013 197 ntBASIC2.15□□□□□ -2.07
LRFN1Q9P244 MIR376A1-201ENST00000616574 68 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms