Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MTATP6P9-201ENST00000515039 680 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 AP002004.2-201ENST00000531656 154 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 MIR3678-201ENST00000578455 94 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 uc_338.6-201ENST00000613544 171 ntBASIC-0.09□□□□□ -2.42
TRIM4Q9C037 RNU6-654P-201ENST00000364373 107 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 RNU6-108P-201ENST00000365558 107 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 RNU6-46P-201ENST00000383860 107 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 MIR635-201ENST00000384830 98 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 MIR518A1-201ENST00000385068 85 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
TRIM4Q9C037 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.1□□□□□ -2.43
TRIM4Q9C037 RPS29P8-201ENST00000445109 171 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.1□□□□□ -2.43
TRIM4Q9C037 SNORA25.12-201ENST00000516202 82 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 RNU6-341P-201ENST00000516973 96 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.1□□□□□ -2.43
TRIM4Q9C037 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.1□□□□□ -2.43
TRIM4Q9C037 MIR4509-3-201ENST00000578671 94 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 MIR548AX-201ENST00000580117 73 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 MIR4509-2-201ENST00000583920 94 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 MIR4723-201ENST00000585070 81 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 AC104695.3-201ENST00000604052 296 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 MIR4509-1-201ENST00000618224 94 ntBASIC-0.1□□□□□ -2.43
TRIM4Q9C037 SNORA32.1-201ENST00000364514 115 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 RNU6-815P-201ENST00000384080 113 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 MIR562-201ENST00000384894 95 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 MIR520C-201ENST00000385005 87 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
TRIM4Q9C037 ZNF885P-201ENST00000420174 1098 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.11□□□□□ -2.43
TRIM4Q9C037 AC073261.1-201ENST00000429409 121 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 HSFY5P-201ENST00000453726 309 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.11□□□□□ -2.43
TRIM4Q9C037 RNU7-138P-201ENST00000459479 64 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 GMFBP1-201ENST00000467831 427 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.11□□□□□ -2.43
TRIM4Q9C037 AC093534.1-201ENST00000504977 132 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 AC097462.1-201ENST00000514125 324 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 RNU7-172P-201ENST00000517125 64 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 AC069113.3-201ENST00000521019 150 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 AC091178.2-201ENST00000584401 117 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 Z84480.1-201ENST00000605131 311 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 AC078938.1-201ENST00000620993 318 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 AC007671.2-201ENST00000637344 619 ntBASIC-0.11□□□□□ -2.43
TRIM4Q9C037 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.11□□□□□ -2.43
TRIM4Q9C037 RNU6-500P-201ENST00000362349 107 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 SNORD114-5-201ENST00000362928 70 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 SNORA42.1-201ENST00000363515 137 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 RNY4P34-201ENST00000364779 95 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 RNU6-245P-201ENST00000384020 107 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 RNU6-195P-201ENST00000411352 109 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 Z98949.2-201ENST00000440996 144 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.12□□□□□ -2.43
TRIM4Q9C037 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.12□□□□□ -2.43
TRIM4Q9C037 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 MTND1P35-201ENST00000526739 508 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 RPL21P9-201ENST00000556149 474 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 AC006435.5-201ENST00000624486 112 ntBASIC-0.12□□□□□ -2.43
TRIM4Q9C037 RNA5SP517-201ENST00000364724 117 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 RNY3-201ENST00000365484 102 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 SNORA2B-201ENST00000384583 137 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 MIR520F-201ENST00000384824 87 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 SNORA40.4-201ENST00000390971 128 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 SNORD83.1-201ENST00000411362 77 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 SSR1P2-201ENST00000415208 787 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 MTCO3P19-201ENST00000415864 321 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 U8.21-201ENST00000459536 136 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRIM4Q9C037 SNORA74.3-201ENST00000517108 154 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 AC023442.1-201ENST00000531247 422 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 MTND4P33-201ENST00000556706 766 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 MIR3612-201ENST00000579753 87 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 AC006566.1-201ENST00000608943 513 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 U2.17-201ENST00000611454 95 ntBASIC-0.13□□□□□ -2.43
TRIM4Q9C037 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.13□□□□□ -2.43
TRIM4Q9C037 RNU6-369P-201ENST00000362515 102 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 RNA5SP48-201ENST00000363969 126 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 SNORD114-9-201ENST00000364370 72 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 MIR520G-201ENST00000385064 90 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 MIR520H-201ENST00000385126 88 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 SNORA40.8-201ENST00000411034 126 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 SNORD71-201ENST00000411292 86 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 ELOCP24-201ENST00000456370 334 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.14□□□□□ -2.43
TRIM4Q9C037 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 RNA5SP54-201ENST00000516951 92 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 AC018645.2-201ENST00000609151 472 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 AC064836.2-201ENST00000609491 462 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 AC010999.1-201ENST00000611856 324 ntBASIC-0.14□□□□□ -2.43
TRIM4Q9C037 RNA5SP214-201ENST00000363378 118 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 MIR452-201ENST00000385020 85 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 RNU6-679P-201ENST00000391003 106 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 RNA5SP95-201ENST00000410319 137 ntBASIC-0.15□□□□□ -2.43
TRIM4Q9C037 AL008987.1-201ENST00000415528 237 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 233.6 ms