Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC019193.3-201ENST00000609144 554 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 GHRLOS.1-201ENST00000610995 70 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 SNORD3E-202ENST00000627253 216 ntBASIC0.82□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.135-201ENST00000363439 95 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.179-201ENST00000363844 90 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.372-201ENST00000365599 102 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 HMGN2P26-201ENST00000463169 339 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 AC093303.1-201ENST00000514549 295 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 FRG2DP-202ENST00000566967 323 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 AC124303.1-201ENST00000605703 360 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 AL021879.1-201ENST00000611756 288 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 AC009248.2-201ENST00000619826 254 ntBASIC0.81□□□□□ -2.28
PCDH11XQ9BZA7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.100-201ENST00000363141 102 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 RNA5SP499-201ENST00000363982 119 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 RNU4-76P-201ENST00000364509 141 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.415-201ENST00000384012 112 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-483P-201ENST00000384088 108 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-505P-201ENST00000384427 107 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 MIR19B1-201ENST00000384829 87 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 MIR653-201ENST00000385279 96 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.615-201ENST00000410769 117 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 AC092628.1-201ENST00000436250 252 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 MTCO3P18-201ENST00000440206 761 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 MTND4P18-201ENST00000447010 465 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 AC091179.3-201ENST00000474761 144 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-496P-201ENST00000516145 99 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-256P-201ENST00000516747 97 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 AC134698.4-201ENST00000523451 826 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 MIR5695-201ENST00000579717 85 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 AC092954.2-201ENST00000609103 430 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 AC243829.3-201ENST00000622177 108 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 AC091925.1-201ENST00000623204 462 ntBASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.8□□□□□ -2.28
PCDH11XQ9BZA7 AP000568.1-201ENST00000282964 442 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.256-201ENST00000364594 104 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-596P-201ENST00000365395 98 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 MIR562-201ENST00000384894 95 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 SNORA12.1-201ENST00000390873 148 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 SNORD12-201ENST00000391002 90 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 AL358176.2-201ENST00000425769 204 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 MTND1P1-201ENST00000445453 368 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 SNORD65B-201ENST00000459126 73 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 RNU7-66P-201ENST00000459469 62 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 RPL30P10-201ENST00000488148 337 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 AC010598.1-201ENST00000510378 103 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 RNU7-175P-201ENST00000515915 61 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 AC036111.3-201ENST00000526389 112 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 MIR3684-201ENST00000579779 74 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 MIR4438-201ENST00000585271 93 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.79□□□□□ -2.28
PCDH11XQ9BZA7 RNU6-727P-201ENST00000363592 107 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 RNY3P3-201ENST00000363816 102 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.184-201ENST00000363884 108 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 SNORD116-1-201ENST00000384335 95 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 Y_RNA.490-201ENST00000384413 102 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 RNU2-16P-201ENST00000410712 136 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 AC243428.1-201ENST00000421099 264 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 AL590632.1-201ENST00000424289 371 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 MTND5P15-201ENST00000434246 349 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 MRPS10P1-201ENST00000448483 130 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 MIR3672-201ENST00000584290 82 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 AC010999.1-201ENST00000611856 324 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 MIR1321-201ENST00000637766 79 ntBASIC0.78□□□□□ -2.28
PCDH11XQ9BZA7 RNU4-79P-201ENST00000362764 141 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-199P-201ENST00000362954 107 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-1252P-201ENST00000363054 104 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 Y_RNA.212-201ENST00000364177 102 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 MTCO3P19-201ENST00000415864 321 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 RPL30P16-201ENST00000419341 429 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 MTND1P29-201ENST00000448112 647 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 AC105758.1-201ENST00000506038 399 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 SNORA31.2-201ENST00000516019 134 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 RNU7-28P-201ENST00000516759 62 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 AC090049.2-201ENST00000550377 109 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.77□□□□□ -2.29
PCDH11XQ9BZA7 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 Y_RNA.51-201ENST00000362725 102 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 RNU6-451P-201ENST00000362921 107 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 SNORD116-11-201ENST00000383882 92 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 Y_RNA.414-201ENST00000384011 101 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 MIR10B-201ENST00000385011 110 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 USMG5P1-201ENST00000425964 177 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 AC098934.3-201ENST00000430450 190 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 MTND3P21-201ENST00000433774 331 ntBASIC0.76□□□□□ -2.29
PCDH11XQ9BZA7 MTATP6P13-201ENST00000438531 667 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms