Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RNU6-873P-201ENST00000363833 107 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 RNU6-245P-201ENST00000384020 107 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 RNU6-700P-201ENST00000391043 107 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 AL390729.2-201ENST00000416137 156 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 SEPT7P4-201ENST00000437076 306 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 MTND4P18-201ENST00000447010 465 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 PCNPP5-201ENST00000452246 481 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 RPL23AP75-201ENST00000491601 451 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 AC010598.1-201ENST00000510378 103 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 RNU6-107P-201ENST00000516643 102 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 RNA5SP54-201ENST00000516951 92 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 AL137161.1-201ENST00000532231 390 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 ELOCP32-201ENST00000548625 324 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 MIR3682-201ENST00000581338 84 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 MIR7844-201ENST00000616161 122 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 AC006435.5-201ENST00000624486 112 ntBASIC-0.13□□□□□ -2.43
LYSMD1Q96S90 RNU6-369P-201ENST00000362515 102 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 SNORA42.1-201ENST00000363515 137 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 RNU2-29P-201ENST00000410423 189 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 AC243428.1-201ENST00000421099 264 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 AL139396.1-201ENST00000421137 167 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 snoU13.21-201ENST00000459368 105 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 GMFBP1-201ENST00000467831 427 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 RPS3AP17-201ENST00000472594 777 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 AC091179.3-201ENST00000474761 144 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 AC018710.1-201ENST00000506509 158 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 RNU11-2P-201ENST00000516898 142 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 TUSC7.1-201ENST00000610969 165 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 AC067863.3-201ENST00000624172 122 ntBASIC-0.14□□□□□ -2.43
LYSMD1Q96S90 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 RNU6-282P-201ENST00000365357 103 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 MIR136-201ENST00000385207 82 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 MIR1302-7-201ENST00000408841 72 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 AC018865.2-201ENST00000423631 129 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 MRPS10P2-201ENST00000431226 381 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 RNA5SP227-201ENST00000516184 113 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 AC091144.1-201ENST00000519573 138 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 SCOCP1-201ENST00000554676 349 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 AC112693.2-201ENST00000556538 232 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 MIR4305-201ENST00000583252 102 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 AL022161.1-201ENST00000604390 213 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 AC078938.1-201ENST00000620993 318 ntBASIC-0.15□□□□□ -2.43
LYSMD1Q96S90 SNORA20B-201ENST00000384220 132 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 RNU6-136P-201ENST00000384663 107 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 RNU6-325P-201ENST00000411132 105 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 AL392103.1-201ENST00000447000 198 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 RNU7-43P-201ENST00000516554 64 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 RNA5SP94-201ENST00000516917 108 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 AP002963.1-201ENST00000530590 184 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 RPL23AP91-201ENST00000569211 455 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 RBM11P1-201ENST00000604951 799 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 AC027279.3-201ENST00000625055 122 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 MIR4251-201ENST00000635819 61 ntBASIC-0.16□□□□□ -2.44
LYSMD1Q96S90 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 MIR513B-201ENST00000385136 84 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 RNU6-903P-201ENST00000391270 109 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 AL049545.1-201ENST00000401856 572 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 AL590002.1-201ENST00000406554 418 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 RNU6-613P-201ENST00000410412 108 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 AC009961.2-201ENST00000435771 251 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 Z82188.1-201ENST00000436709 154 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 AL359672.1-201ENST00000442302 409 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 RNA5SP20-201ENST00000515976 84 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 RNU6-863P-201ENST00000515989 104 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 SNORA14.1-201ENST00000516113 141 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 MIR4771-2-201ENST00000577758 74 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 MIR4771-1-201ENST00000582617 74 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 AC008536.2-201ENST00000607284 349 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 uc_338.16-201ENST00000621804 95 ntBASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.17□□□□□ -2.44
LYSMD1Q96S90 SNORD118-201ENST00000363593 134 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 RNU6-302P-201ENST00000365249 107 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 SNORA8.2-201ENST00000384372 139 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 RNU6-933P-201ENST00000384424 107 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 RNU6-541P-201ENST00000384709 110 ntBASIC-0.18□□□□□ -2.44
LYSMD1Q96S90 RPL30P16-201ENST00000419341 429 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms