Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 SNORD92-201ENST00000585078 85 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 AC244669.1-204ENST00000621564 178 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 AC073869.9-201ENST00000641610 120 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 MIR125B2-201ENST00000385128 89 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 MIRLET7B-201ENST00000385140 83 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 RPL31P54-201ENST00000429803 370 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 AL139824.2-201ENST00000458731 1095 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 GMFBP1-201ENST00000467831 427 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 AC008608.1-201ENST00000603910 127 ntBASIC-2.14□□□□□ -2.75
VPS13AQ96RL7 RNU6-164P-201ENST00000364604 103 ntBASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 SNORD28-201ENST00000384706 75 ntBASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 MIR487B-201ENST00000385021 84 ntBASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 AL592447.1-201ENST00000447592 540 ntBASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 RNU7-188P-201ENST00000517063 64 ntBASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 AL450472.1-202ENST00000637286 180 ntBASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 RNU6-905P-201ENST00000384434 107 ntBASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 RNA5SP467-201ENST00000391274 118 ntBASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 AC018714.1-201ENST00000605028 208 ntBASIC-2.15□□□□□ -2.75
VPS13AQ96RL7 AL078595.1-201ENST00000404458 226 ntBASIC-2.16□□□□□ -2.75
VPS13AQ96RL7 AC074085.1-201ENST00000413598 418 ntBASIC-2.16□□□□□ -2.75
VPS13AQ96RL7 AC243428.1-201ENST00000421099 264 ntBASIC-2.16□□□□□ -2.75
VPS13AQ96RL7 TMEM251P1-201ENST00000503717 318 ntBASIC-2.16□□□□□ -2.75
VPS13AQ96RL7 AC011352.1-201ENST00000512300 793 ntBASIC-2.16□□□□□ -2.75
VPS13AQ96RL7 RNU6-390P-201ENST00000516259 103 ntBASIC-2.16□□□□□ -2.75
VPS13AQ96RL7 RNA5SP47-201ENST00000517230 109 ntBASIC-2.16□□□□□ -2.75
VPS13AQ96RL7 Y_RNA.328-201ENST00000365208 113 ntBASIC-2.16□□□□□ -2.76
VPS13AQ96RL7 MIR1302-7-201ENST00000408841 72 ntBASIC-2.16□□□□□ -2.76
VPS13AQ96RL7 AC010531.2-201ENST00000465012 153 ntBASIC-2.16□□□□□ -2.76
VPS13AQ96RL7 AL589994.1-201ENST00000404962 340 ntBASIC-2.16□□□□□ -2.76
VPS13AQ96RL7 SNORD115-40-201ENST00000606510 82 ntBASIC-2.16□□□□□ -2.76
VPS13AQ96RL7 RNU6-179P-201ENST00000363350 107 ntBASIC-2.17□□□□□ -2.76
VPS13AQ96RL7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-2.17□□□□□ -2.76
VPS13AQ96RL7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-2.17□□□□□ -2.76
VPS13AQ96RL7 AC020891.4-201ENST00000605745 93 ntBASIC-2.17□□□□□ -2.76
VPS13AQ96RL7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-2.17□□□□□ -2.76
VPS13AQ96RL7 RNU5A-1-201ENST00000362698 116 ntBASIC-2.17□□□□□ -2.76
VPS13AQ96RL7 AL390123.1-201ENST00000603216 237 ntBASIC-2.17□□□□□ -2.76
VPS13AQ96RL7 SNORD115-12-201ENST00000362583 82 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 SNORD115-9-201ENST00000362912 82 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 SNORD115-19-201ENST00000363098 82 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 SNORD115-18-201ENST00000363293 82 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 SNORD115-17-201ENST00000364612 82 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 SNORD74.6-201ENST00000364796 70 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 SNORD115-20-201ENST00000365099 82 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 MIR4778-201ENST00000577635 80 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 AC097478.2-201ENST00000610572 514 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 RNY4P9-201ENST00000363194 97 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 AC068135.1-201ENST00000446164 246 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 AC010587.1-201ENST00000505809 469 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 RNU6-613P-201ENST00000410412 108 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 MCFD2P1-201ENST00000417812 300 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 RNU7-27P-201ENST00000459281 62 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 AC010486.3-201ENST00000511602 785 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 ACA59.2-201ENST00000517061 156 ntBASIC-2.18□□□□□ -2.76
VPS13AQ96RL7 RNU4-21P-201ENST00000362802 126 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 SNORA26.5-201ENST00000391215 123 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 SNORA25.17-201ENST00000517184 124 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 uc_338.10-201ENST00000621872 182 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 MIR6874-201ENST00000635894 71 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 SNORA24-201ENST00000384096 131 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 Y_RNA.547-201ENST00000384654 119 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 DPRXP1-201ENST00000426312 460 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 SNORA31.14-201ENST00000516728 116 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 AP001189.2-201ENST00000527320 189 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 AC012433.1-201ENST00000588916 398 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 AL596327.1-201ENST00000603629 213 ntBASIC-2.19□□□□□ -2.76
VPS13AQ96RL7 Y_RNA.708-201ENST00000516950 96 ntBASIC-2.2□□□□□ -2.76
VPS13AQ96RL7 DEFB108D-201ENST00000527787 222 ntBASIC-2.2□□□□□ -2.76
VPS13AQ96RL7 MT-TP-201ENST00000387461 68 ntBASIC-2.2□□□□□ -2.76
VPS13AQ96RL7 MTND3P20-201ENST00000407663 186 ntBASIC-2.2□□□□□ -2.76
VPS13AQ96RL7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-2.2□□□□□ -2.76
VPS13AQ96RL7 RNU5A-6P-201ENST00000384136 116 ntBASIC-2.2□□□□□ -2.76
VPS13AQ96RL7 RNU6-140P-201ENST00000384566 108 ntBASIC-2.2□□□□□ -2.76
VPS13AQ96RL7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-2.2□□□□□ -2.76
VPS13AQ96RL7 SNORA25.13-201ENST00000516395 103 ntBASIC-2.2□□□□□ -2.76
VPS13AQ96RL7 RNU6-484P-201ENST00000384016 107 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 MIR548A2-201ENST00000384956 97 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 ZNF736P7Y-201ENST00000425158 820 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 RNU6-1095P-201ENST00000516148 108 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 RNU6-741P-201ENST00000383889 107 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 MED28P2-201ENST00000475771 317 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 AC087894.1-201ENST00000538359 518 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 AL022067.1-201ENST00000602426 454 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 AC034229.4-201ENST00000607861 441 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 MIR4275-201ENST00000636486 87 ntBASIC-2.21□□□□□ -2.76
VPS13AQ96RL7 RNU6-128P-201ENST00000383976 107 ntBASIC-2.22□□□□□ -2.76
VPS13AQ96RL7 RNU5A-7P-201ENST00000515979 116 ntBASIC-2.22□□□□□ -2.76
VPS13AQ96RL7 MIR548AM-201ENST00000584298 74 ntBASIC-2.22□□□□□ -2.76
VPS13AQ96RL7 AC015688.2-201ENST00000584523 262 ntBASIC-2.22□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms